ID C4QV16_KOMPG Unreviewed; 339 AA.
AC C4QV16;
DT 07-JUL-2009, integrated into UniProtKB/TrEMBL.
DT 07-JUL-2009, sequence version 1.
DT 27-MAR-2024, entry version 65.
DE SubName: Full=Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl4Ap {ECO:0000313|EMBL:CAY67086.1};
GN OrderedLocusNames=PAS_chr1-3_0034 {ECO:0000313|EMBL:CAY67086.1};
OS Komagataella phaffii (strain GS115 / ATCC 20864) (Yeast) (Pichia pastoris).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes;
OC Saccharomycetales; Phaffomycetaceae; Komagataella.
OX NCBI_TaxID=644223 {ECO:0000313|EMBL:CAY67086.1, ECO:0000313|Proteomes:UP000000314};
RN [1] {ECO:0000313|EMBL:CAY67086.1, ECO:0000313|Proteomes:UP000000314}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=GS115 / ATCC 20864 {ECO:0000313|Proteomes:UP000000314};
RX PubMed=19465926; DOI=10.1038/nbt.1544;
RA De Schutter K., Lin Y.C., Tiels P., Van Hecke A., Glinka S.,
RA Weber-Lehmann J., Rouze P., Van de Peer Y., Callewaert N.;
RT "Genome sequence of the recombinant protein production host Pichia
RT pastoris.";
RL Nat. Biotechnol. 27:561-566(2009).
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL4 family.
CC {ECO:0000256|ARBA:ARBA00010528}.
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DR EMBL; FN392319; CAY67086.1; -; Genomic_DNA.
DR RefSeq; XP_002489370.1; XM_002489325.1.
DR AlphaFoldDB; C4QV16; -.
DR SMR; C4QV16; -.
DR STRING; 644223.C4QV16; -.
DR EnsemblFungi; CAY67086; CAY67086; PAS_chr1-3_0034.
DR GeneID; 8197347; -.
DR KEGG; ppa:PAS_chr1-3_0034; -.
DR eggNOG; KOG1475; Eukaryota.
DR HOGENOM; CLU_026535_4_0_1; -.
DR InParanoid; C4QV16; -.
DR OMA; ASWTHRI; -.
DR OrthoDB; 275636at2759; -.
DR Proteomes; UP000000314; Chromosome 1.
DR GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR Gene3D; 3.40.1370.10; -; 1.
DR InterPro; IPR025755; Ribos_uL4_C_dom.
DR InterPro; IPR002136; Ribosomal_uL4.
DR InterPro; IPR023574; Ribosomal_uL4_dom_sf.
DR InterPro; IPR013000; Ribosomal_uL4_euk/arc_CS.
DR InterPro; IPR045240; Ribosomal_uL4_euk/arch.
DR PANTHER; PTHR19431; 60S RIBOSOMAL PROTEIN L4; 1.
DR PANTHER; PTHR19431:SF0; 60S RIBOSOMAL PROTEIN L4; 1.
DR Pfam; PF14374; Ribos_L4_asso_C; 1.
DR Pfam; PF00573; Ribosomal_L4; 1.
DR SUPFAM; SSF52166; Ribosomal protein L4; 1.
DR PROSITE; PS00939; RIBOSOMAL_L1E; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000000314};
KW Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274};
KW Ribosomal protein {ECO:0000256|ARBA:ARBA00022980}.
FT DOMAIN 273..338
FT /note="Large ribosomal subunit protein uL4 C-terminal"
FT /evidence="ECO:0000259|Pfam:PF14374"
SQ SEQUENCE 339 AA; 36906 MW; A5605BE035C0CC15 CRC64;
MSTRPQVTVI SVEGKPSSTS LPLPAVFKAP IRGDIVQSVF TRINKNKRQA YAVSEKAGHQ
TSAESWGTGR AVARIPRVGG GGTHRSGQGA FGNMCRGGRM FAPTKIWRKW HVRVNLNEKR
YATASAIAAT SVQSLVLARG HRIEQIAEIP LVVSNDLEAI QKTKDAIAAL KALGASDDLI
RVIKSKKLRA GKGKYRNRRF TQRRGPLIVF NEDKGLVKAL RNIPGVETCN VRTLGLLQLA
PGAHLGRFVI WTESAFAALD SVYGSETTES VKSNYSLPKN IITNTDISSV INSAEVQAAI
RPSLAGKPTH LHVKKVNPLK NHEVMLKLNP YAKVLAEKK
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