ID C4XX73_CLAL4 Unreviewed; 366 AA.
AC C4XX73;
DT 28-JUL-2009, integrated into UniProtKB/TrEMBL.
DT 28-JUL-2009, sequence version 1.
DT 24-JAN-2024, entry version 53.
DE RecName: Full=UPF3 domain-containing protein {ECO:0000259|Pfam:PF03467};
GN ORFNames=CLUG_00546 {ECO:0000313|EMBL:EEQ36423.1};
OS Clavispora lusitaniae (strain ATCC 42720) (Yeast) (Candida lusitaniae).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes;
OC Saccharomycetales; Metschnikowiaceae; Clavispora.
OX NCBI_TaxID=306902 {ECO:0000313|EMBL:EEQ36423.1, ECO:0000313|Proteomes:UP000007703};
RN [1] {ECO:0000313|EMBL:EEQ36423.1, ECO:0000313|Proteomes:UP000007703}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 42720 {ECO:0000313|EMBL:EEQ36423.1,
RC ECO:0000313|Proteomes:UP000007703};
RX PubMed=19465905; DOI=10.1038/nature08064;
RA Butler G., Rasmussen M.D., Lin M.F., Santos M.A., Sakthikumar S.,
RA Munro C.A., Rheinbay E., Grabherr M., Forche A., Reedy J.L., Agrafioti I.,
RA Arnaud M.B., Bates S., Brown A.J., Brunke S., Costanzo M.C.,
RA Fitzpatrick D.A., de Groot P.W., Harris D., Hoyer L.L., Hube B., Klis F.M.,
RA Kodira C., Lennard N., Logue M.E., Martin R., Neiman A.M., Nikolaou E.,
RA Quail M.A., Quinn J., Santos M.C., Schmitzberger F.F., Sherlock G.,
RA Shah P., Silverstein K.A., Skrzypek M.S., Soll D., Staggs R.,
RA Stansfield I., Stumpf M.P., Sudbery P.E., Srikantha T., Zeng Q., Berman J.,
RA Berriman M., Heitman J., Gow N.A., Lorenz M.C., Birren B.W., Kellis M.,
RA Cuomo C.A.;
RT "Evolution of pathogenicity and sexual reproduction in eight Candida
RT genomes.";
RL Nature 459:657-662(2009).
CC -!- SIMILARITY: Belongs to the RENT3 family.
CC {ECO:0000256|ARBA:ARBA00005991}.
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DR EMBL; CH408076; EEQ36423.1; -; Genomic_DNA.
DR RefSeq; XP_002619387.1; XM_002619341.1.
DR AlphaFoldDB; C4XX73; -.
DR STRING; 306902.C4XX73; -.
DR GeneID; 8499685; -.
DR KEGG; clu:CLUG_00546; -.
DR VEuPathDB; FungiDB:CLUG_00546; -.
DR HOGENOM; CLU_756506_0_0_1; -.
DR InParanoid; C4XX73; -.
DR OMA; PYHASKI; -.
DR OrthoDB; 2015193at2759; -.
DR Proteomes; UP000007703; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR CDD; cd12455; RRM_like_Smg4_UPF3; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR005120; UPF3_dom.
DR Pfam; PF03467; Smg4_UPF3; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000007703}.
FT DOMAIN 38..202
FT /note="UPF3"
FT /evidence="ECO:0000259|Pfam:PF03467"
FT REGION 1..33
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 181..366
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 198..215
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 247..265
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 311..338
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 366 AA; 40415 MW; 5C171929DCC35DB0 CRC64;
MSAAAALDPP KKEPKKRKSR QKRQKNQPPA IEYEDPDLKV VVRLLPPSLK EEDFLAQAKA
LCPALGTELA WTRFFYMRGS RNVQAFEEPI CSRAYFLFPT KETADEFKRQ ISGASFLEPE
SGDHYSAQTM KPIFGSVTQV EPATSLGDII KDSLFIKFMA SYAAKTKNID LSALLSEIRE
QKRKENRKKK DSKASSKKSS KQNTPAPASR TEGTGKNEAT ADKIEATSQK TKRKRKSKKA
KKTASETTRE TITVPNTQQG PAAEQIDKPS ETGKPKKKKK SRRERERAKK AQEGSKTASA
GTGAGSGLDV SEGKRSEHSD PSNKKPSEEN ENTGEEKKKA KKRNRKRKPT KGSADSANPA
ADQNAA
//
