ID C5CLJ3_VARPS Unreviewed; 301 AA.
AC C5CLJ3;
DT 28-JUL-2009, integrated into UniProtKB/TrEMBL.
DT 28-JUL-2009, sequence version 1.
DT 27-MAR-2024, entry version 80.
DE SubName: Full=Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACS17388.1};
GN OrderedLocusNames=Vapar_0735 {ECO:0000313|EMBL:ACS17388.1};
OS Variovorax paradoxus (strain S110).
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Comamonadaceae; Variovorax.
OX NCBI_TaxID=543728 {ECO:0000313|EMBL:ACS17388.1};
RN [1] {ECO:0000313|EMBL:ACS17388.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=S110 {ECO:0000313|EMBL:ACS17388.1};
RG US DOE Joint Genome Institute;
RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D.,
RA Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C.,
RA Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Orwin P.,
RA Leadbetter J.R., Spain J.C., Han J.I.;
RT "Complete sequence of chromosome 1 of Variovorax paradoxus S110.";
RL Submitted (JUN-2009) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC {ECO:0000256|ARBA:ARBA00009437}.
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DR EMBL; CP001635; ACS17388.1; -; Genomic_DNA.
DR AlphaFoldDB; C5CLJ3; -.
DR STRING; 543728.Vapar_0735; -.
DR KEGG; vap:Vapar_0735; -.
DR eggNOG; COG0583; Bacteria.
DR HOGENOM; CLU_039613_16_4_4; -.
DR OrthoDB; 9786526at2; -.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR CDD; cd08422; PBP2_CrgA_like; 1.
DR Gene3D; 3.40.190.290; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR005119; LysR_subst-bd.
DR InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR30537; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR PANTHER; PTHR30537:SF21; TRANSCRIPTIONAL REGULATOR-RELATED; 1.
DR Pfam; PF00126; HTH_1; 1.
DR Pfam; PF03466; LysR_substrate; 1.
DR PRINTS; PR00039; HTHLYSR.
DR SUPFAM; SSF53850; Periplasmic binding protein-like II; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50931; HTH_LYSR; 1.
PE 3: Inferred from homology;
FT DOMAIN 4..61
FT /note="HTH lysR-type"
FT /evidence="ECO:0000259|PROSITE:PS50931"
SQ SEQUENCE 301 AA; 33128 MW; C511C0EC6562C608 CRC64;
MKIENLSDLQ VLVQTARGGT LTAAAHALGM TPAAASATLK RLETQLGARL FERSTRAMRL
TSQGQTLLDY AVRAFELLDE GESLVTAERG ELVGTLRVAA PSDLTRSTLL PWFDEFLALH
PGVQLSLSVG DRLLDVTRDE VDVALRYGAL ADSRLVARPF ALTNPLLTAS PAYLRRHSAP
KTPQDLVHHN CLTFDRGGRR HRTWRFAQNG QWTEVRVKGD RSVDDASLAR EWAVAGLGIV
LKSALDVRED LRKGALVRLL PEWDTEPYPL HALLPSGRFV PARVRALVNF LALKFEALTA
A
//
