ID C5D1B5_VARPS Unreviewed; 153 AA.
AC C5D1B5;
DT 28-JUL-2009, integrated into UniProtKB/TrEMBL.
DT 28-JUL-2009, sequence version 1.
DT 27-MAR-2024, entry version 69.
DE SubName: Full=Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ACS22186.1};
GN OrderedLocusNames=Vapar_5594 {ECO:0000313|EMBL:ACS22186.1};
OS Variovorax paradoxus (strain S110).
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Comamonadaceae; Variovorax.
OX NCBI_TaxID=543728 {ECO:0000313|EMBL:ACS22186.1};
RN [1] {ECO:0000313|EMBL:ACS22186.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=S110 {ECO:0000313|EMBL:ACS22186.1};
RG US DOE Joint Genome Institute;
RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D.,
RA Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C.,
RA Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Orwin P.,
RA Leadbetter J.R., Spain J.C., Han J.I.;
RT "Complete sequence of chromosome 2 of Variovorax paradoxus S110.";
RL Submitted (JUN-2009) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP001636; ACS22186.1; -; Genomic_DNA.
DR AlphaFoldDB; C5D1B5; -.
DR STRING; 543728.Vapar_5594; -.
DR KEGG; vap:Vapar_5594; -.
DR eggNOG; COG1522; Bacteria.
DR HOGENOM; CLU_091233_5_3_4; -.
DR OrthoDB; 5476at2; -.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR Gene3D; 3.30.70.920; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR000485; AsnC-type_HTH_dom.
DR InterPro; IPR011008; Dimeric_a/b-barrel.
DR InterPro; IPR019888; Tscrpt_reg_AsnC-like.
DR InterPro; IPR019887; Tscrpt_reg_AsnC/Lrp_C.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR30154:SF53; HTH-TYPE TRANSCRIPTIONAL REGULATOR LRPB; 1.
DR PANTHER; PTHR30154; LEUCINE-RESPONSIVE REGULATORY PROTEIN; 1.
DR Pfam; PF01037; AsnC_trans_reg; 1.
DR Pfam; PF13404; HTH_AsnC-type; 1.
DR PRINTS; PR00033; HTHASNC.
DR SMART; SM00344; HTH_ASNC; 1.
DR SUPFAM; SSF54909; Dimeric alpha+beta barrel; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50956; HTH_ASNC_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 5..74
FT /note="HTH asnC-type"
FT /evidence="ECO:0000259|PROSITE:PS50956"
SQ SEQUENCE 153 AA; 16803 MW; A7D1157D15693EA8 CRC64;
MDGRLDDLDR HLLSLLQANA REPAANLARK LKIARTTVVA RIARLEREGI VAGYGVRLGH
KLEHAAVRAI CGLSVNAKNA PAVIRALERV PEVEELSAVS GQFDYMVFLR CDTPEKLDVL
LDQLGQLEGI NQTQTSIVLS RKIDRRSALP SVS
//
