ID C5I6A7_9CALI Unreviewed; 93 AA.
AC C5I6A7;
DT 28-JUL-2009, integrated into UniProtKB/TrEMBL.
DT 28-JUL-2009, sequence version 1.
DT 24-JAN-2024, entry version 33.
DE SubName: Full=RNA dependent RNA polymerase {ECO:0000313|EMBL:ACR55589.1};
DE Flags: Fragment;
GN Name=RdRp {ECO:0000313|EMBL:ACR55589.1};
OS Sapovirus pig/77/2004/SVN.
OC Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes;
OC Picornavirales; Caliciviridae; Sapovirus; Sapporo virus.
OX NCBI_TaxID=640166 {ECO:0000313|EMBL:ACR55589.1};
RN [1] {ECO:0000313|EMBL:ACR55589.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Pig/77/2004/SVN {ECO:0000313|EMBL:ACR55589.1};
RA Zimsek Mijovski J., Poljsak-Prijatelj M., Barlic-Maganja D.;
RL Submitted (FEB-2009) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ACR55589.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Pig/77/2004/SVN {ECO:0000313|EMBL:ACR55589.1};
RX PubMed=19931649; DOI=10.1016/j.meegid.2009.11.010;
RA Mijovski J.Z., Poljsak-Prijatelj M., Steyer A., Barlic-Maganja D.,
RA Koren S.;
RT "Detection and molecular characterisation of noroviruses and sapoviruses in
RT asymptomatic swine and cattle in Slovenian farms.";
RL Infect. Genet. Evol. 10:413-420(2010).
RN [3] {ECO:0000313|EMBL:ACR55589.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Pig/77/2004/SVN {ECO:0000313|EMBL:ACR55589.1};
RX PubMed=19940055; DOI=10.1128/JCM.01279-09;
RA Reuter G., Zimsek-Mijovski J., Poljsak-Prijatelj M., Di Bartolo I.,
RA Ruggeri F.M., Kantala T., Maunula L., Kiss I., Kecskemeti S., Halaihel N.,
RA Buesa J., Johnsen C., Hjulsager C.K., Larsen L.E., Koopmans M.,
RA Bottiger B.;
RT "Incidence, diversity, and molecular epidemiology of sapoviruses in swine
RT across Europe.";
RL J. Clin. Microbiol. 48:363-368(2010).
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DR EMBL; FJ715797; ACR55589.1; -; Genomic_RNA.
DR GO; GO:0000166; F:nucleotide binding; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0003968; F:RNA-dependent RNA polymerase activity; IEA:UniProtKB-KW.
DR GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR Gene3D; 3.30.70.270; -; 1.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR001205; RNA-dir_pol_C.
DR Pfam; PF00680; RdRP_1; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
PE 4: Predicted;
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW RNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022484};
KW Transferase {ECO:0000256|ARBA:ARBA00022679};
KW Viral RNA replication {ECO:0000256|ARBA:ARBA00022953}.
FT DOMAIN 3..92
FT /note="RNA-directed RNA polymerase C-terminal"
FT /evidence="ECO:0000259|Pfam:PF00680"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:ACR55589.1"
FT NON_TER 93
FT /evidence="ECO:0000313|EMBL:ACR55589.1"
SQ SEQUENCE 93 AA; 9825 MW; 042F3250DA4511E3 CRC64;
DVTSASVEIL ASYAEDSPLT SAAIATLCAP ATGRLDDMGL TVTTGLPSGM PFTSVINSIN
HMIYFAMATL EAYGEFGVPY VGNVFDNETI YTY
//
