ID C5NS03_SORBI Unreviewed; 204 AA.
AC C5NS03;
DT 01-SEP-2009, integrated into UniProtKB/TrEMBL.
DT 01-SEP-2009, sequence version 1.
DT 27-MAR-2024, entry version 73.
DE SubName: Full=DL related protein {ECO:0000313|EMBL:BAH83537.1};
GN Name=SbDL {ECO:0000313|EMBL:BAH83537.1};
GN ORFNames=SORBI_3001G456000 {ECO:0000313|EMBL:EER95274.1};
OS Sorghum bicolor (Sorghum) (Sorghum vulgare).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum.
OX NCBI_TaxID=4558 {ECO:0000313|EMBL:BAH83537.1};
RN [1] {ECO:0000313|EMBL:BAH83537.1}
RP NUCLEOTIDE SEQUENCE.
RX PubMed=19556707; DOI=10.1266/ggs.84.137;
RA Ishikawa M., Ohmori Y., Tanaka W., Hirabayashi C., Murai K., Ogihara Y.,
RA Yamaguchi T., Hirano H.;
RT "The spatial expression patterns of DROOPING LEAF orthologs suggest a
RT conserved function in grasses.";
RL Genes Genet. Syst. 84:137-146(2009).
RN [2] {ECO:0000313|EMBL:EER95274.1, ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=19189423; DOI=10.1038/nature07723;
RA Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J.,
RA Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J.,
RA Feltus F.A., Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M.,
RA Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L.,
RA Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P.,
RA Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman,
RA Ware D., Westhoff P., Mayer K.F., Messing J., Rokhsar D.S.;
RT "The Sorghum bicolor genome and the diversification of grasses.";
RL Nature 457:551-556(2009).
RN [3] {ECO:0000313|EMBL:EER95274.1}
RP NUCLEOTIDE SEQUENCE.
RA Paterson A., Mullet J., Bowers J., Bruggmann R., Dubchak I., Grimwood J.,
RA Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA Spannagl M., Tang H., Wang X., Wicker T., Bharti A., Chapman J., Feltus F.,
RA Gowik U., Grigoriev I., Lyons E., Maher C., Martis M., Narechania A.,
RA Otillar R., Penning B., Salamov A., Wang Y., Zhang L., Carpita N.,
RA Freeling M., Gingle A., Hash C., Keller B., Klein P., Kresovich S.,
RA Mccann M., Ming R., Peterson D., Rahman M., Ware D., Westhoff P., Mayer K.,
RA Messing J., Sims D., Jenkins J., Shu S., Rokhsar D.;
RT "WGS assembly of Sorghum bicolor.";
RL Submitted (FEB-2017) to the EMBL/GenBank/DDBJ databases.
RN [4] {ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=29161754; DOI=10.1111/tpj.13781;
RA McCormick R.F., Truong S.K., Sreedasyam A., Jenkins J., Shu S., Sims D.,
RA Kennedy M., Amirebrahimi M., Weers B.D., McKinley B., Mattison A.,
RA Morishige D.T., Grimwood J., Schmutz J., Mullet J.E.;
RT "The Sorghum bicolor reference genome: improved assembly, gene annotations,
RT a transcriptome atlas, and signatures of genome organization.";
RL Plant J. 93:338-354(2018).
CC -!- SIMILARITY: Belongs to the YABBY family.
CC {ECO:0000256|ARBA:ARBA00010325}.
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DR EMBL; AB470268; BAH83537.1; -; mRNA.
DR EMBL; CM000760; EER95274.1; -; Genomic_DNA.
DR RefSeq; XP_002468276.1; XM_002468231.1.
DR AlphaFoldDB; C5NS03; -.
DR EnsemblPlants; EER95274; EER95274; SORBI_3001G456000.
DR GeneID; 8056888; -.
DR Gramene; EER95274; EER95274; SORBI_3001G456000.
DR KEGG; sbi:8056888; -.
DR eggNOG; ENOG502QVCI; Eukaryota.
DR HOGENOM; CLU_071156_2_1_1; -.
DR OrthoDB; 2785032at2759; -.
DR Proteomes; UP000000768; Chromosome 1.
DR ExpressionAtlas; C5NS03; baseline.
DR GO; GO:0032502; P:developmental process; IEA:UniProt.
DR CDD; cd00084; HMG-box_SF; 1.
DR Gene3D; 1.10.30.10; High mobility group box domain; 1.
DR InterPro; IPR036910; HMG_box_dom_sf.
DR InterPro; IPR006780; YABBY.
DR PANTHER; PTHR31675:SF1; PROTEIN CRABS CLAW; 1.
DR PANTHER; PTHR31675; PROTEIN YABBY 6-RELATED; 1.
DR Pfam; PF04690; YABBY; 1.
DR SUPFAM; SSF47095; HMG-box; 1.
PE 2: Evidence at transcript level;
KW Reference proteome {ECO:0000313|Proteomes:UP000000768}.
SQ SEQUENCE 204 AA; 22985 MW; DF1ED432685E2B0D CRC64;
MDMVSQSEHL CYVRCTYCNT VLAVGVPCKR LMDTVTVKCG HCNNLSYLSP RPPMVQPLSP
TDHPLGPFQC QGPCNDCRRN QPLPLASPTS TELSPRMPFV VKPPEKKHRL PSAYNRFMRE
EIQRIKAAKP DIPHREAFSM AAKNWAKCDP RCSTTASTAT SNSAPEPRVV PTPQVTEARF
DLEDRAKEQV IESFDIFKQI ERSI
//
