ID C5XZK1_SORBI Unreviewed; 216 AA.
AC C5XZK1;
DT 01-SEP-2009, integrated into UniProtKB/TrEMBL.
DT 01-SEP-2009, sequence version 1.
DT 27-MAR-2024, entry version 56.
DE RecName: Full=Late embryogenesis abundant protein LEA-2 subgroup domain-containing protein {ECO:0000259|Pfam:PF03168};
GN ORFNames=SORBI_3004G118100 {ECO:0000313|EMBL:EES06624.1};
OS Sorghum bicolor (Sorghum) (Sorghum vulgare).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum.
OX NCBI_TaxID=4558 {ECO:0000313|EMBL:EES06624.1, ECO:0000313|Proteomes:UP000000768};
RN [1] {ECO:0000313|EMBL:EES06624.1, ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=19189423; DOI=10.1038/nature07723;
RA Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J.,
RA Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J.,
RA Feltus F.A., Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M.,
RA Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L.,
RA Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P.,
RA Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman,
RA Ware D., Westhoff P., Mayer K.F., Messing J., Rokhsar D.S.;
RT "The Sorghum bicolor genome and the diversification of grasses.";
RL Nature 457:551-556(2009).
RN [2] {ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=29161754; DOI=10.1111/tpj.13781;
RA McCormick R.F., Truong S.K., Sreedasyam A., Jenkins J., Shu S., Sims D.,
RA Kennedy M., Amirebrahimi M., Weers B.D., McKinley B., Mattison A.,
RA Morishige D.T., Grimwood J., Schmutz J., Mullet J.E.;
RT "The Sorghum bicolor reference genome: improved assembly, gene annotations,
RT a transcriptome atlas, and signatures of genome organization.";
RL Plant J. 93:338-354(2018).
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CM000763; EES06624.1; -; Genomic_DNA.
DR RefSeq; XP_002453648.1; XM_002453603.1.
DR AlphaFoldDB; C5XZK1; -.
DR STRING; 4558.C5XZK1; -.
DR EnsemblPlants; EES06624; EES06624; SORBI_3004G118100.
DR GeneID; 8059065; -.
DR Gramene; EES06624; EES06624; SORBI_3004G118100.
DR KEGG; sbi:8059065; -.
DR eggNOG; ENOG502QSZC; Eukaryota.
DR HOGENOM; CLU_050605_4_0_1; -.
DR InParanoid; C5XZK1; -.
DR OMA; PIIEMNG; -.
DR OrthoDB; 777203at2759; -.
DR Proteomes; UP000000768; Chromosome 4.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR Gene3D; 2.60.40.1820; -; 1.
DR InterPro; IPR004864; LEA_2.
DR PANTHER; PTHR31234; LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY; 1.
DR PANTHER; PTHR31234:SF43; LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY; 1.
DR Pfam; PF03168; LEA_2; 1.
DR SUPFAM; SSF117070; LEA14-like; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000000768};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 26..49
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 93..193
FT /note="Late embryogenesis abundant protein LEA-2 subgroup"
FT /evidence="ECO:0000259|Pfam:PF03168"
SQ SEQUENCE 216 AA; 22368 MW; D57B7845AAE0230A CRC64;
MIRSTGDAMG SNAAVVRTPF LRLRCVLISC GIISILVAAA LLAVTLTVFR VREPVMTMNA
ISLKDPVAAA AAAAASSSTT PPPLLTLTVV ADVSVKNPNA ASLRYAATET SVYYRARQVG
EALGPPGTAP ARRTVRLNVT VDVAVGALLG DPAFLEDVVA AGAVAVATAT RVRGRVAVLG
GLVHRRVVLE MNCTATVAVA DMSISDQRCL QHVWLP
//
