ID C5Z137_SORBI Unreviewed; 978 AA.
AC C5Z137;
DT 01-SEP-2009, integrated into UniProtKB/TrEMBL.
DT 01-SEP-2009, sequence version 1.
DT 27-MAR-2024, entry version 69.
DE RecName: Full=Leucine-rich repeat-containing N-terminal plant-type domain-containing protein {ECO:0000259|Pfam:PF08263};
GN ORFNames=SORBI_3009G061400 {ECO:0000313|EMBL:EES17792.1};
OS Sorghum bicolor (Sorghum) (Sorghum vulgare).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum.
OX NCBI_TaxID=4558 {ECO:0000313|EMBL:EES17792.1, ECO:0000313|Proteomes:UP000000768};
RN [1] {ECO:0000313|EMBL:EES17792.1, ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=19189423; DOI=10.1038/nature07723;
RA Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J.,
RA Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J.,
RA Feltus F.A., Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M.,
RA Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L.,
RA Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P.,
RA Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman,
RA Ware D., Westhoff P., Mayer K.F., Messing J., Rokhsar D.S.;
RT "The Sorghum bicolor genome and the diversification of grasses.";
RL Nature 457:551-556(2009).
RN [2] {ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=29161754; DOI=10.1111/tpj.13781;
RA McCormick R.F., Truong S.K., Sreedasyam A., Jenkins J., Shu S., Sims D.,
RA Kennedy M., Amirebrahimi M., Weers B.D., McKinley B., Mattison A.,
RA Morishige D.T., Grimwood J., Schmutz J., Mullet J.E.;
RT "The Sorghum bicolor reference genome: improved assembly, gene annotations,
RT a transcriptome atlas, and signatures of genome organization.";
RL Plant J. 93:338-354(2018).
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DR EMBL; CM000768; EES17792.1; -; Genomic_DNA.
DR RefSeq; XP_002439362.1; XM_002439317.1.
DR AlphaFoldDB; C5Z137; -.
DR EnsemblPlants; EES17792; EES17792; SORBI_3009G061400.
DR GeneID; 8080943; -.
DR Gramene; EES17792; EES17792; SORBI_3009G061400.
DR KEGG; sbi:8080943; -.
DR eggNOG; ENOG502QV35; Eukaryota.
DR HOGENOM; CLU_000288_18_4_1; -.
DR InParanoid; C5Z137; -.
DR OMA; QNDIFIG; -.
DR OrthoDB; 1207388at2759; -.
DR Proteomes; UP000000768; Chromosome 9.
DR GO; GO:0005886; C:plasma membrane; IBA:GO_Central.
DR Gene3D; 3.80.10.10; Ribonuclease Inhibitor; 6.
DR InterPro; IPR001611; Leu-rich_rpt.
DR InterPro; IPR003591; Leu-rich_rpt_typical-subtyp.
DR InterPro; IPR032675; LRR_dom_sf.
DR InterPro; IPR013210; LRR_N_plant-typ.
DR PANTHER; PTHR48004; OS01G0149700 PROTEIN; 1.
DR PANTHER; PTHR48004:SF108; OS06G0627500 PROTEIN; 1.
DR Pfam; PF00560; LRR_1; 18.
DR Pfam; PF13855; LRR_8; 2.
DR Pfam; PF08263; LRRNT_2; 1.
DR SMART; SM00369; LRR_TYP; 15.
DR SUPFAM; SSF52058; L domain-like; 2.
DR SUPFAM; SSF52047; RNI-like; 1.
PE 4: Predicted;
KW Leucine-rich repeat {ECO:0000256|ARBA:ARBA00022614};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000000768};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Signal {ECO:0000256|ARBA:ARBA00022729, ECO:0000256|SAM:SignalP};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT SIGNAL 1..31
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 32..978
FT /note="Leucine-rich repeat-containing N-terminal plant-type
FT domain-containing protein"
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5002960922"
FT TRANSMEM 878..898
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 38..71
FT /note="Leucine-rich repeat-containing N-terminal plant-
FT type"
FT /evidence="ECO:0000259|Pfam:PF08263"
FT REGION 915..938
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 950..978
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 950..965
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 978 AA; 102551 MW; 2FDC6ABA11658D25 CRC64;
MAIKQSNSFS PRVHAGLSLL FCILLAPVSL ATPATAPAAL LEVKSGLTDP EGVLSGWSLE
ADVCSWHGIT CLPGEVGIVT GLNLSGYGLS GVIPPAISGL VSVESIDLSS NSLTGPIPPE
LGVLENLRTL LLFSNSLTGT IPPELGLLKN LKVLRIGDNR LHGEIPPQLG DCSELETLGL
AYCQLNGTIP AELGNLKQLQ KLALDNNTLT GGIPEQLAGC VSLRFLSVSD NMLQGNIPSF
LGSFSDLQSL NLANNQFSGE IPVEIGNLSS LTYLNLLGNS LTGAIPAELN RLGQLQVLDL
SMNNISGKVS ISPAQLKNLK YLVLSGNLLD GAIPEDLCAG DSSSLLENLF LAGNNLEGGI
EALLNCDALQ SIDVSNNSFT GVIPPGIDRL PGLVNLALHN NSFTGGLPRQ IGNLSNLEIL
SLFHNGLTGG IPSEIGRLQK LKLLFLYENQ MSGTIPDELT NCTSLEEVDF FGNHFHGPIP
ERIGNLRNLA VLQLRQNDLS GPIPASLGEC RSLQALALAD NRLTGVLPET FGQLTELSVV
TLYNNSLEGP LPESLFQLKN LTVINFSHNR FAGSLVPLLG STSLAVLALT SNSFSGVIPA
VVARSRNMVR LQLGGNRLTG AIPAELGNLT RLSMLDLSLN NLSGDIPAEL SSCVELTHLK
LDGNSLTGTV PAWLGSLRSL GELDLSWNVF TGGIPPELGN CSGLLKLSLS DNHLTGSIPP
EIGRLTSLNV LNLNKNSLTG AIPPSLQQCN KLYELRLSEN SLEGPIPPEL GQLSELQVIL
DLSRNRLSGE IPASLGSLVK LERLNLSSNR LDGQIPSSLL QLTSLHRLNL SDNLLSGAVP
AGLSSFPAAS FVGNELCGAP LPPCGPRSPA RRLSGTEVVV IVAGIALVSA VVCVALLYTM
LRVWSNWRAV SVSNSDGEES VHGGGGHGGG GGKWGDGKYW KVGSPVSWSA EQKHSSGSET
ASVLHGKSTE AAAGAGKS
//
