ID C6KIL8_AURAN Unreviewed; 159 AA.
AC C6KIL8;
DT 01-SEP-2009, integrated into UniProtKB/TrEMBL.
DT 01-SEP-2009, sequence version 1.
DT 08-NOV-2023, entry version 54.
DE RecName: Full=Small ribosomal subunit protein uS5c {ECO:0000256|ARBA:ARBA00035156, ECO:0000256|HAMAP-Rule:MF_01307};
GN Name=rps5 {ECO:0000256|HAMAP-Rule:MF_01307,
GN ECO:0000313|EMBL:ACS36824.1};
GN ORFNames=AuanCp041 {ECO:0000313|EMBL:ACS36824.1};
OS Aureococcus anophagefferens (Harmful bloom alga).
OG Plastid; Chloroplast {ECO:0000313|EMBL:ACS36824.1}.
OC Eukaryota; Sar; Stramenopiles; Ochrophyta; Pelagophyceae; Pelagomonadales;
OC Aureococcus.
OX NCBI_TaxID=44056 {ECO:0000313|EMBL:ACS36824.1, ECO:0000313|Proteomes:UP000002729};
RN [1] {ECO:0000313|EMBL:ACS36824.1, ECO:0000313|Proteomes:UP000002729}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCMP 1984 {ECO:0000313|EMBL:ACS36824.1,
RC ECO:0000313|Proteomes:UP000002729};
RX AGRICOLA=IND44379834; DOI=10.1111/j.1529-8817.2010.00841.x;
RA Ong H.C., Wilhelm S.W., Gobler C.J., Bullerjahn G., Jacobs M.A., McKay J.,
RA Sims E.H., Gillett W.G., Zhou Y., Haugen E., Rocap G., Cattolico R.A.;
RT "Analyses of the complete chloroplast genome sequences of two members of
RT the pelagophyceae: Aureococcus anophagefferens CCMP1984 and Aureoumbra
RT lagunensis CCMP1507.";
RL J. Phycol. 46:602-615(2010).
CC -!- FUNCTION: With S4 and S12 plays an important role in translational
CC accuracy. {ECO:0000256|HAMAP-Rule:MF_01307}.
CC -!- SUBUNIT: Part of the 30S ribosomal subunit. Contacts protein S4.
CC {ECO:0000256|HAMAP-Rule:MF_01307}.
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast {ECO:0000256|HAMAP-
CC Rule:MF_01307}.
CC -!- DOMAIN: The N-terminal domain interacts with the head of the 30S
CC subunit; the C-terminal domain interacts with the body and contacts
CC protein S4. The interaction surface between S4 and S5 is involved in
CC control of translational fidelity. {ECO:0000256|HAMAP-Rule:MF_01307}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uS5 family.
CC {ECO:0000256|ARBA:ARBA00008945, ECO:0000256|HAMAP-Rule:MF_01307,
CC ECO:0000256|RuleBase:RU003823}.
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DR EMBL; GQ231541; ACS36824.1; -; Genomic_DNA.
DR RefSeq; YP_003002060.1; NC_012898.1.
DR AlphaFoldDB; C6KIL8; -.
DR GeneID; 8097225; -.
DR KEGG; aaf:AuanCp041; -.
DR InParanoid; C6KIL8; -.
DR Proteomes; UP000002729; Chloroplast.
DR GO; GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
DR GO; GO:0015935; C:small ribosomal subunit; IEA:InterPro.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:UniProtKB-UniRule.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR Gene3D; 3.30.160.20; -; 1.
DR Gene3D; 3.30.230.10; -; 1.
DR HAMAP; MF_01307_B; Ribosomal_S5_B; 1.
DR InterPro; IPR020568; Ribosomal_Su5_D2-typ_SF.
DR InterPro; IPR000851; Ribosomal_uS5.
DR InterPro; IPR005712; Ribosomal_uS5_bac-type.
DR InterPro; IPR005324; Ribosomal_uS5_C.
DR InterPro; IPR013810; Ribosomal_uS5_N.
DR InterPro; IPR018192; Ribosomal_uS5_N_CS.
DR InterPro; IPR014721; Ribsml_uS5_D2-typ_fold_subgr.
DR NCBIfam; TIGR01021; rpsE_bact; 1.
DR PANTHER; PTHR48277; MITOCHONDRIAL RIBOSOMAL PROTEIN S5; 1.
DR PANTHER; PTHR48277:SF1; MITOCHONDRIAL RIBOSOMAL PROTEIN S5; 1.
DR Pfam; PF00333; Ribosomal_S5; 1.
DR Pfam; PF03719; Ribosomal_S5_C; 1.
DR SUPFAM; SSF54768; dsRNA-binding domain-like; 1.
DR SUPFAM; SSF54211; Ribosomal protein S5 domain 2-like; 1.
DR PROSITE; PS00585; RIBOSOMAL_S5; 1.
DR PROSITE; PS50881; S5_DSRBD; 1.
PE 3: Inferred from homology;
KW Chloroplast {ECO:0000313|EMBL:ACS36824.1};
KW Plastid {ECO:0000313|EMBL:ACS36824.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000002729};
KW Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274, ECO:0000256|HAMAP-
KW Rule:MF_01307};
KW Ribosomal protein {ECO:0000256|ARBA:ARBA00022980, ECO:0000256|HAMAP-
KW Rule:MF_01307};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|HAMAP-
KW Rule:MF_01307};
KW rRNA-binding {ECO:0000256|ARBA:ARBA00022730, ECO:0000256|HAMAP-
KW Rule:MF_01307}.
FT DOMAIN 18..81
FT /note="S5 DRBM"
FT /evidence="ECO:0000259|PROSITE:PS50881"
SQ SEQUENCE 159 AA; 16781 MW; C88FCAFA7387496E CRC64;
MVQEKNTNRN NNRANTNWVR KVVKVRRITK VVKGGKKLRF GALVIIGNEK GLVGVGVGKA
DDVVEAVKKA ANDGRRNLIM VPLTKTFSIP HVSTGQFGAS NVLLKPASAG SGVIAGGSVR
TLLEAAGVQN IMAKQLGSNN LLNNARATVC ALQALKTLK
//
