ID C6VRP5_DYAFD Unreviewed; 1182 AA.
AC C6VRP5;
DT 22-SEP-2009, integrated into UniProtKB/TrEMBL.
DT 22-SEP-2009, sequence version 1.
DT 27-MAR-2024, entry version 66.
DE SubName: Full=Putative phytochrome sensor protein {ECO:0000313|EMBL:ACT92748.1};
GN OrderedLocusNames=Dfer_1503 {ECO:0000313|EMBL:ACT92748.1};
OS Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / CIP 107007 / KCTC
OS 52180 / NS114).
OC Bacteria; Bacteroidota; Cytophagia; Cytophagales; Spirosomataceae;
OC Dyadobacter.
OX NCBI_TaxID=471854 {ECO:0000313|EMBL:ACT92748.1, ECO:0000313|Proteomes:UP000002011};
RN [1] {ECO:0000313|EMBL:ACT92748.1, ECO:0000313|Proteomes:UP000002011}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 700827 / DSM 18053 / CIP 107007 / KCTC 52180 / NS114
RC {ECO:0000313|Proteomes:UP000002011};
RX PubMed=21304649; DOI=10.4056/sigs.19262;
RA Lang E., Lapidus A., Chertkov O., Brettin T., Detter J.C., Han C.,
RA Copeland A., Glavina Del Rio T., Nolan M., Chen F., Lucas S., Tice H.,
RA Cheng J.F., Land M., Hauser L., Chang Y.J., Jeffries C.D., Kopitz M.,
RA Bruce D., Goodwin L., Pitluck S., Ovchinnikova G., Pati A., Ivanova N.,
RA Mavrommatis K., Chen A., Palaniappan K., Chain P., Bristow J., Eisen J.A.,
RA Markowitz V., Hugenholtz P., Goker M., Rohde M., Kyrpides N.C., Klenk H.P.;
RT "Complete genome sequence of Dyadobacter fermentans type strain (NS114).";
RL Stand. Genomic Sci. 1:133-140(2009).
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DR EMBL; CP001619; ACT92748.1; -; Genomic_DNA.
DR AlphaFoldDB; C6VRP5; -.
DR STRING; 471854.Dfer_1503; -.
DR KEGG; dfe:Dfer_1503; -.
DR eggNOG; COG1956; Bacteria.
DR eggNOG; COG2972; Bacteria.
DR eggNOG; COG3292; Bacteria.
DR HOGENOM; CLU_000445_28_2_10; -.
DR Proteomes; UP000002011; Chromosome.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0000155; F:phosphorelay sensor kinase activity; IEA:InterPro.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 3.30.565.10; Histidine kinase-like ATPase, C-terminal domain; 1.
DR Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 2.
DR InterPro; IPR003018; GAF.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR036890; HATPase_C_sf.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR011110; Reg_prop.
DR InterPro; IPR010559; Sig_transdc_His_kin_internal.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR011123; Y_Y_Y.
DR PANTHER; PTHR34220; SENSOR HISTIDINE KINASE YPDA; 1.
DR PANTHER; PTHR34220:SF7; SENSOR HISTIDINE KINASE YPDA; 1.
DR Pfam; PF13185; GAF_2; 1.
DR Pfam; PF06580; His_kinase; 1.
DR Pfam; PF07494; Reg_prop; 2.
DR Pfam; PF07495; Y_Y_Y; 1.
DR SMART; SM00065; GAF; 1.
DR SUPFAM; SSF55874; ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase; 1.
DR SUPFAM; SSF63829; Calcium-dependent phosphotriesterase; 3.
DR SUPFAM; SSF55781; GAF domain-like; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000002011};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 759..777
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 805..952
FT /note="GAF"
FT /evidence="ECO:0000259|SMART:SM00065"
SQ SEQUENCE 1182 AA; 134665 MW; 3C9E4E09C387F8AC CRC64;
MGLWLYSGGL RAQTLFQNIR WQDGLSAKQI RCLYKDSSGF LWIGTSAGLD RYDGAVVRRF
HDAAGGQKHY VNAIWPFGGE DTLMIGLRRG VLLFDKKNGR FSHDPRFREL ANRYIVSIRQ
DGRQRIWIGT SDGLFVYQNN KLGPVTDLFP DARKFDFRGF ELKVMVYDTL RRGMWVGGNR
PLFIDCKADR VYFKGNNVLR SPLLESAKVH AIAVDRTGNV WYGCDTDPSL NYWNYRTGKV
DTHYALDGKL IGEGCNFIFM DRQDRLWVST WLFAAFVKEP GQPFRKIEYS QDQAYTIAYG
HFRDAISDAQ GNVWLGTING VSKTLPKNPI EAIYKLPSFP FFLETNFAHA NSITVDGSMI
VACKEDGVVF YNTADRKYQK FVTPSKRLRN NRFVMTAKVD DTWWFAGFDG IYSLSPGETV
LRRFNQTKPG LASYEAPFVF LDKQKNIWFQ IDGDAIYRYQ PATKTTLRFD GTDPRYGLFA
FADAQAFIPL SNGDILFSVQ GKGMLRYDHQ REHFSMLPAP DIAEEYIYEM RQSKTGEIWA
AATSSGLLKI DAGGKVIRSI TTKDGLPYDQ ISSLGIDDKG VIWCASREGL ATYDPASNNV
SKVELDLGKT LQDYWNYVTL AEGKIYAVML DHVVVINPRH FASVPVQKPP AITSVKIFGQ
ERLQDLDGGP LELNPDESFV AFQYASLSHR DIPSLQYSYQ LVGLDNDWVM AGRNITASYT
NLLPGEYVFK VRSTDENGRW MRTAQTLSLK VLPHWWQTWW FFVVCALATG GSLYWFARIY
TKRRHKKDLD DTIEYFANSV YGDNSVNEIC WDIARNCISK LHFEDCVVYL LDKETNTLIQ
KAAYGPKSPK EYEILNPIEI PVGEGIVGTA AATGLPQIIG DTSKDPRYII DDQARFSELA
VPILHEGQVI GVIDSEHPSK NFYNHDHVRA ISTIAAISAN KITEAMARAQ AERQEIMLLR
INKMLAESQL MALRAQMNPH FIFNCLNSIQ ECIVTQKYTE ASKYLNKFAK LFRLVLNNSG
RNLVTIAEER DVLELYLELE LMRFGQGFTY SIEIDPELED DYVRLPSMLL QPFVENGLWH
GLMHKQGDRH MRISFFLTGP EQFACEIEDN GIGRKKSAEL RQNSSRTREH ESRGIRICED
RIDVLARQGN HAQMEVTDLY DDAGNPTGTL VRIELSTYLY QT
//
