ID C8YLB6_XANCI Unreviewed; 261 AA.
AC C8YLB6;
DT 03-NOV-2009, integrated into UniProtKB/TrEMBL.
DT 03-NOV-2009, sequence version 1.
DT 24-JAN-2024, entry version 35.
DE SubName: Full=RpoD {ECO:0000313|EMBL:ACV72451.1};
DE Flags: Fragment;
GN Name=rpoD {ECO:0000313|EMBL:ACV72451.1};
OS Xanthomonas citri pv. anacardii.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Xanthomonadales;
OC Xanthomonadaceae; Xanthomonas.
OX NCBI_TaxID=454595 {ECO:0000313|EMBL:ACV72451.1};
RN [1] {ECO:0000313|EMBL:ACV72451.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=CFBP2913 {ECO:0000313|EMBL:ACV72451.1}, CFBP2914
RC {ECO:0000313|EMBL:ACV72452.1}, JY542 {ECO:0000313|EMBL:ACV72551.1},
RC LA099 {ECO:0000313|EMBL:ACV72552.1}, LA100
RC {ECO:0000313|EMBL:ACV72553.1}, and LA102
RC {ECO:0000313|EMBL:ACV72554.1};
RX PubMed=19680562; DOI=10.1371/journal.pone.0006632;
RA Hajri A., Brin C., Hunault G., Lardeux F., Lemaire C., Manceau C.,
RA Boureau T., Poussier S.;
RT "A 'repertoire for repertoire' hypothesis: repertoires of type three
RT effectors are candidate determinants of host specificity in Xanthomonas.";
RL PLoS ONE 4:E6632-E6632(2009).
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DR EMBL; FJ561622; ACV72451.1; -; Genomic_DNA.
DR EMBL; FJ561623; ACV72452.1; -; Genomic_DNA.
DR EMBL; FJ561722; ACV72551.1; -; Genomic_DNA.
DR EMBL; FJ561723; ACV72552.1; -; Genomic_DNA.
DR EMBL; FJ561724; ACV72553.1; -; Genomic_DNA.
DR EMBL; FJ561725; ACV72554.1; -; Genomic_DNA.
DR AlphaFoldDB; C8YLB6; -.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0016987; F:sigma factor activity; IEA:InterPro.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR Gene3D; 1.10.601.10; RNA Polymerase Primary Sigma Factor; 1.
DR InterPro; IPR009042; RNA_pol_sigma70_r1_2.
DR InterPro; IPR007631; RNA_pol_sigma_70_non-ess.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR Pfam; PF04546; Sigma70_ner; 1.
DR Pfam; PF00140; Sigma70_r1_2; 1.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
PE 4: Predicted;
FT DOMAIN 6..37
FT /note="RNA polymerase sigma-70 region 1.2"
FT /evidence="ECO:0000259|Pfam:PF00140"
FT DOMAIN 47..261
FT /note="RNA polymerase sigma factor 70 non-essential"
FT /evidence="ECO:0000259|Pfam:PF04546"
FT REGION 96..128
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 99..120
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:ACV72451.1"
FT NON_TER 261
FT /evidence="ECO:0000313|EMBL:ACV72451.1"
SQ SEQUENCE 261 AA; 28744 MW; 66053E6FEC2A14C1 CRC64;
GGRTTDPVRM YMREMGTVEL LTREGEIAIA KRIEEGLSQV QAALGVFPLS TEMLLADYEA
HKEGKKRLAE IVVGFNDLIE EADAAAAALA AAGPVAVSDD EAVDEDDDED GDDDAAEEEA
GPTGPDPVEV ATRMENLANE YAKFKKVYAK NGAEHKLVVK AREDMAAIFT TLKLPLPLTD
ALVTQLRGVV NGIKDHERKV LHLATTVARM PRKDFIRSWE GNQTNLEWVE DALKRKQKWS
SALRDVKDQI ISEQQGSIEM E
//
