ID D0LZ72_HALO1 Unreviewed; 284 AA.
AC D0LZ72;
DT 15-DEC-2009, integrated into UniProtKB/TrEMBL.
DT 15-DEC-2009, sequence version 1.
DT 27-MAR-2024, entry version 82.
DE SubName: Full=Transcriptional regulator, AraC family {ECO:0000313|EMBL:ACY16334.1};
GN OrderedLocusNames=Hoch_3835 {ECO:0000313|EMBL:ACY16334.1};
OS Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).
OC Bacteria; Myxococcota; Polyangia; Haliangiales; Kofleriaceae; Haliangium.
OX NCBI_TaxID=502025 {ECO:0000313|EMBL:ACY16334.1, ECO:0000313|Proteomes:UP000001880};
RN [1] {ECO:0000313|EMBL:ACY16334.1, ECO:0000313|Proteomes:UP000001880}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 14365 / CIP 107738 / JCM 11303 / AJ 13395 / SMP-2
RC {ECO:0000313|Proteomes:UP000001880};
RX PubMed=21304682; DOI=10.4056/sigs.69.1277;
RG US DOE Joint Genome Institute (JGI-PGF);
RA Ivanova N., Daum C., Lang E., Abt B., Kopitz M., Saunders E., Lapidus A.,
RA Lucas S., Glavina Del Rio T., Nolan M., Tice H., Copeland A., Cheng J.F.,
RA Chen F., Bruce D., Goodwin L., Pitluck S., Mavromatis K., Pati A.,
RA Mikhailova N., Chen A., Palaniappan K., Land M., Hauser L., Chang Y.J.,
RA Jeffries C.D., Detter J.C., Brettin T., Rohde M., Goker M., Bristow J.,
RA Markowitz V., Eisen J.A., Hugenholtz P., Kyrpides N.C., Klenk H.P.;
RT "Complete genome sequence of Haliangium ochraceum type strain (SMP-2).";
RL Stand. Genomic Sci. 2:96-106(2010).
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DR EMBL; CP001804; ACY16334.1; -; Genomic_DNA.
DR RefSeq; WP_012828933.1; NC_013440.1.
DR AlphaFoldDB; D0LZ72; -.
DR STRING; 502025.Hoch_3835; -.
DR KEGG; hoh:Hoch_3835; -.
DR eggNOG; COG0662; Bacteria.
DR eggNOG; COG2207; Bacteria.
DR HOGENOM; CLU_000445_87_1_7; -.
DR OrthoDB; 9804543at2; -.
DR Proteomes; UP000001880; Chromosome.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR CDD; cd06124; cupin_NimR-like_N; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 2.60.120.10; Jelly Rolls; 1.
DR InterPro; IPR013096; Cupin_2.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR018060; HTH_AraC.
DR InterPro; IPR018062; HTH_AraC-typ_CS.
DR InterPro; IPR014710; RmlC-like_jellyroll.
DR InterPro; IPR011051; RmlC_Cupin_sf.
DR InterPro; IPR020449; Tscrpt_reg_HTH_AraC-type.
DR PANTHER; PTHR11019; HTH-TYPE TRANSCRIPTIONAL REGULATOR NIMR; 1.
DR PANTHER; PTHR11019:SF159; TRANSCRIPTIONAL REGULATOR-RELATED; 1.
DR Pfam; PF07883; Cupin_2; 1.
DR Pfam; PF12833; HTH_18; 1.
DR PRINTS; PR00032; HTHARAC.
DR SMART; SM00342; HTH_ARAC; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF51182; RmlC-like cupins; 1.
DR PROSITE; PS00041; HTH_ARAC_FAMILY_1; 1.
DR PROSITE; PS01124; HTH_ARAC_FAMILY_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000001880};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 185..282
FT /note="HTH araC/xylS-type"
FT /evidence="ECO:0000259|PROSITE:PS01124"
SQ SEQUENCE 284 AA; 30854 MW; 69346BF5BA844420 CRC64;
MSDAEVAATA EAAAEVDVDA APPACFGLAD EMGPRHTPWH RHRRHQILYA LTGSLKLEVT
EAQWLLPPQR AAFIPAGCEH RVRCQRSAAL RTVYLDTATF AAGEDAAAPA PVPVIAAGTC
VFSVTSLARE MLLYAMRWGP LRSADDRASE ILADAFFSAL ALLSREWIRA DAGLRLPRPR
SPDLSRACEH ALADLAAASM ARAAHAAAVS PRTLARRFRD ETQMSWRSFL RTARVLRAME
LLAEPGARVT EVALSVGFDN PGAFSTSFRA LTGESPSSYQ RRFI
//
