ID   D0RNV5_9PROT            Unreviewed;       127 AA.
AC   D0RNV5;
DT   15-DEC-2009, integrated into UniProtKB/TrEMBL.
DT   15-DEC-2009, sequence version 1.
DT   24-JAN-2024, entry version 46.
DE   SubName: Full=Transcription termination factor {ECO:0000313|EMBL:EMH80100.1};
GN   ORFNames=HIMB114_00004800 {ECO:0000313|EMBL:EMH80100.1};
OS   alpha proteobacterium HIMB114.
OC   Bacteria; Pseudomonadota; Alphaproteobacteria; Candidatus Pelagibacterales;
OC   Candidatus Pelagibacteraceae.
OX   NCBI_TaxID=684719 {ECO:0000313|EMBL:EMH80100.1, ECO:0000313|Proteomes:UP000033990};
RN   [1] {ECO:0000313|EMBL:EMH80100.1, ECO:0000313|Proteomes:UP000033990}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=HIMB114 {ECO:0000313|EMBL:EMH80100.1,
RC   ECO:0000313|Proteomes:UP000033990};
RA   Rappe M., Ferriera S., Johnson J., Kravitz S., Beeson K., Sutton G.,
RA   Rogers Y.-H., Friedman R., Frazier M., Venter J.C.;
RL   Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:EMH80100.1, ECO:0000313|Proteomes:UP000033990}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=HIMB114 {ECO:0000313|EMBL:EMH80100.1,
RC   ECO:0000313|Proteomes:UP000033990};
RA   Grote J., Thrash C., Huggett M.J., Landry Z., Carini P., Giovannoni S.J.,
RA   Rappe M.S., Brinkac L., Kim M., Beeson K., Ferriera S., Sutton G.,
RA   Friedman R., Venter J.C.;
RL   Submitted (SEP-2012) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the NusB family.
CC       {ECO:0000256|ARBA:ARBA00005952}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:EMH80100.1}.
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DR   EMBL; ADAC02000001; EMH80100.1; -; Genomic_DNA.
DR   AlphaFoldDB; D0RNV5; -.
DR   STRING; 684719.HIMB114_00004800; -.
DR   eggNOG; COG0781; Bacteria.
DR   OrthoDB; 9797817at2; -.
DR   Proteomes; UP000033990; Unassembled WGS sequence.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0006353; P:DNA-templated transcription termination; IEA:InterPro.
DR   GO; GO:0031564; P:transcription antitermination; IEA:UniProtKB-KW.
DR   Gene3D; 1.10.940.10; NusB-like; 1.
DR   InterPro; IPR035926; NusB-like_sf.
DR   InterPro; IPR011605; NusB_fam.
DR   InterPro; IPR006027; NusB_RsmB_TIM44.
DR   PANTHER; PTHR11078:SF3; ANTITERMINATION NUSB DOMAIN-CONTAINING PROTEIN; 1.
DR   PANTHER; PTHR11078; N UTILIZATION SUBSTANCE PROTEIN B-RELATED; 1.
DR   Pfam; PF01029; NusB; 1.
DR   SUPFAM; SSF48013; NusB-like; 1.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000033990};
KW   RNA-binding {ECO:0000256|ARBA:ARBA00022884};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription antitermination {ECO:0000256|ARBA:ARBA00022814};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT   DOMAIN          34..121
FT                   /note="NusB/RsmB/TIM44"
FT                   /evidence="ECO:0000259|Pfam:PF01029"
SQ   SEQUENCE   127 AA;  14676 MW;  6CB8CF61F851E512 CRC64;
     MKSGTRTKLV QKIYEKTKNP DGVIDFGKDP YIRHIKKVFK GYFEQEEQLN EILSRSLSAE
     IKQKNLDSLL NIILKTSIYE LKFCEKIPFK VVINQYLDVT AQFYGNDQKR LVNGVLDNVA
     KSLNSSN
//