ID D1BEN0_SANKS Unreviewed; 850 AA.
AC D1BEN0;
DT 19-JAN-2010, integrated into UniProtKB/TrEMBL.
DT 19-JAN-2010, sequence version 1.
DT 27-MAR-2024, entry version 82.
DE SubName: Full=RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:ACZ23316.1};
GN OrderedLocusNames=Sked_34250 {ECO:0000313|EMBL:ACZ23316.1};
OS Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74).
OC Bacteria; Actinomycetota; Actinomycetes; Micrococcales; Sanguibacteraceae;
OC Sanguibacter.
OX NCBI_TaxID=446469 {ECO:0000313|EMBL:ACZ23316.1, ECO:0000313|Proteomes:UP000000322};
RN [1] {ECO:0000313|EMBL:ACZ23316.1, ECO:0000313|Proteomes:UP000000322}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74
RC {ECO:0000313|Proteomes:UP000000322};
RX PubMed=21304646;
RA Ivanova N., Sikorski J., Sims D., Brettin T., Detter J.C., Han C.,
RA Lapidus A., Copeland A., Glavina Del Rio T., Nolan M., Chen F., Lucas S.,
RA Tice H., Cheng J.F., Bruce D., Goodwin L., Pitluck S., Pati A.,
RA Mavromatis K., Chen A., Palaniappan K., D'haeseleer P., Chain P.,
RA Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Goker M., Pukall R.,
RA Klenk H.P., Kyrpides N.C.;
RT "Complete genome sequence of Sanguibacter keddieii type strain (ST-74).";
RL Stand. Genomic Sci. 1:110-118(2009).
CC -!- SIMILARITY: Belongs to the sigma-70 factor family. ECF subfamily.
CC {ECO:0000256|ARBA:ARBA00010641}.
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DR EMBL; CP001819; ACZ23316.1; -; Genomic_DNA.
DR AlphaFoldDB; D1BEN0; -.
DR STRING; 446469.Sked_34250; -.
DR KEGG; ske:Sked_34250; -.
DR eggNOG; COG1595; Bacteria.
DR eggNOG; COG3266; Bacteria.
DR HOGENOM; CLU_335512_0_0_11; -.
DR OrthoDB; 4990598at2; -.
DR Proteomes; UP000000322; Chromosome.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR Gene3D; 1.10.1740.10; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR039425; RNA_pol_sigma-70-like.
DR InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR InterPro; IPR007627; RNA_pol_sigma70_r2.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR027383; Znf_put.
DR NCBIfam; TIGR02937; sigma70-ECF; 1.
DR PANTHER; PTHR43133:SF58; BLL3014 PROTEIN; 1.
DR PANTHER; PTHR43133; RNA POLYMERASE ECF-TYPE SIGMA FACTO; 1.
DR Pfam; PF04542; Sigma70_r2; 1.
DR Pfam; PF13490; zf-HC2; 1.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
PE 3: Inferred from homology;
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 73..131
FT /note="RNA polymerase sigma-70 region 2"
FT /evidence="ECO:0000259|Pfam:PF04542"
FT DOMAIN 232..265
FT /note="Putative zinc-finger"
FT /evidence="ECO:0000259|Pfam:PF13490"
FT REGION 1..39
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 328..362
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 395..516
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 697..746
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 759..850
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 332..346
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 439..504
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 850 AA; 84875 MW; 71765F3524E12E20 CRC64;
MDQGRGQTDR QPPGGVAGGS GAPGRSARGR LRGGLGLPAG RTLDRLSDEE LVARARAHAA
SDTSALDPFD VLWRRHADAG RRAAVGITRA SDPDDLVQEA YLRIYSAVSR GKGPDGPFRP
YLYQSIRNIA ATWAARPRDD SVDLMPDLSD GTDISETVLE GTVTATAFRS LPARWQEVLW
YSEVEGLEPA DIAPMLALSP SAVSALAYRA REGLRRAWLQ AHVSSTSLPA GCRWSAERMG
DAHRGALSGT ARARFDEHVD GCARCTIVLG EVDEVSKRLG LVLVPLLVGM PWAAFQTMTA
AGAGPAVGSG TAVGAGAAVG SDAAMDSGAA AGSGAASSSV GSSPTAASPV RAHGRSAGAT
SRRVGSGALA VMVVAGLATV SGAVVLASNL AGGSEVAAGA PPAPPSTTSS PASPPVGAVP
SEEGTVEEPV GDPEDSPTVE VPPVAPTRPW REIPDPPSTP EPQEPAAVPA LPTLPPLAPY
EPYEPAAPTD PTAPSEPTDP TGPSEPTDPT TEVPDVTGPA VPTLTGPPAG VPLTTFPTVS
GVADPGVTVV LTTGDGASLT TAVADDAGAW STPVCPDVTA APGACLADVA TLVVQAHALD
ESTGLSSEVS DALEWDFERP TLSVPAEAGP VVAGDVSVLL EGAAGQYVQV SIDGVPTGRY
HLMPQSTPLV WSGATPGAHA LSVRYVTVTG TGDAVRVTGF GPNRTSTVEV EPQPAPPGAV
PPEEEPAGDA AAPRQPGDGN AGDVSADDTA LVGEATVGET GVGEAEGGEK AAGEATGGAP
GAAGLAPPDE ATADGATAGA VAREGLDDIP TGSSADPQKS APAPEVSPGS EAAPAPTPSE
PHGETFGETR
//
