ID D2E436_PINTO Unreviewed; 169 AA.
AC D2E436;
DT 09-FEB-2010, integrated into UniProtKB/TrEMBL.
DT 09-FEB-2010, sequence version 1.
DT 27-MAR-2024, entry version 47.
DE RecName: Full=Photosystem I assembly protein Ycf3 {ECO:0000256|HAMAP-Rule:MF_00439};
GN Name=ycf3 {ECO:0000256|HAMAP-Rule:MF_00439,
GN ECO:0000313|EMBL:ACZ82333.1};
GN ORFNames=PLC-7073 {ECO:0000313|EMBL:ACZ82333.1};
OS Pinus torreyana subsp. torreyana.
OG Plastid; Chloroplast {ECO:0000313|EMBL:ACZ82333.1}.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Pinopsida; Pinidae; Conifers I; Pinales; Pinaceae; Pinus;
OC Pinus subgen. Pinus.
OX NCBI_TaxID=638956 {ECO:0000313|EMBL:ACZ82333.1};
RN [1] {ECO:0000313|EMBL:ACZ82333.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=TORR02 {ECO:0000313|EMBL:ACZ82333.1};
RX PubMed=19954512; DOI=10.1186/1741-7007-7-84;
RA Parks M., Cronn R., Liston A.;
RT "Increasing phylogenetic resolution at low taxonomic levels using massively
RT parallel sequencing of chloroplast genomes.";
RL BMC Biol. 7:84-84(2009).
RN [2] {ECO:0000313|EMBL:ACZ82333.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=TORR02 {ECO:0000313|EMBL:ACZ82333.1};
RA Parks M.B., Liston A., Cronn R.C.;
RL Submitted (APR-2009) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:ACZ82333.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=TORR02 {ECO:0000313|EMBL:ACZ82333.1};
RX PubMed=20331774; DOI=10.1111/j.1365-294X.2009.04474.x;
RA Whittall J.B., Syring J., Parks M., Buenrostro J., Dick C., Liston A.,
RA Cronn R.;
RT "Finding a (pine) needle in a haystack: chloroplast genome sequence
RT divergence in rare and widespread pines.";
RL Mol. Ecol. 19:100-114(2010).
CC -!- FUNCTION: Seems to be required for the assembly of the photosystem I
CC complex. {ECO:0000256|HAMAP-Rule:MF_00439}.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004170};
CC Peripheral membrane protein {ECO:0000256|ARBA:ARBA00004170}. Plastid,
CC chloroplast thylakoid membrane {ECO:0000256|HAMAP-Rule:MF_00439};
CC Peripheral membrane protein {ECO:0000256|HAMAP-Rule:MF_00439}.
CC -!- SIMILARITY: Belongs to the Ycf3 family. {ECO:0000256|HAMAP-
CC Rule:MF_00439}.
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DR EMBL; FJ899564; ACZ82333.1; -; Genomic_DNA.
DR GO; GO:0009535; C:chloroplast thylakoid membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0015979; P:photosynthesis; IEA:UniProtKB-UniRule.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR HAMAP; MF_00439; Ycf3; 1.
DR InterPro; IPR022818; PSI_Ycf3_assembly.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR001440; TPR_1.
DR InterPro; IPR019734; TPR_repeat.
DR PANTHER; PTHR26312; TETRATRICOPEPTIDE REPEAT PROTEIN 5; 1.
DR PANTHER; PTHR26312:SF87; TETRATRICOPEPTIDE REPEAT PROTEIN 5; 1.
DR Pfam; PF00515; TPR_1; 1.
DR SMART; SM00028; TPR; 3.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS50005; TPR; 2.
DR PROSITE; PS50293; TPR_REGION; 1.
PE 3: Inferred from homology;
KW Chloroplast {ECO:0000313|EMBL:ACZ82333.1};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|HAMAP-Rule:MF_00439};
KW Photosynthesis {ECO:0000256|ARBA:ARBA00022531, ECO:0000256|HAMAP-
KW Rule:MF_00439}; Plastid {ECO:0000313|EMBL:ACZ82333.1};
KW Repeat {ECO:0000256|HAMAP-Rule:MF_00439};
KW Thylakoid {ECO:0000256|HAMAP-Rule:MF_00439};
KW TPR repeat {ECO:0000256|ARBA:ARBA00022803, ECO:0000256|HAMAP-
KW Rule:MF_00439}.
FT REPEAT 35..68
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 35..68
FT /note="TPR 1"
FT /evidence="ECO:0000256|HAMAP-Rule:MF_00439"
FT REPEAT 72..105
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 72..105
FT /note="TPR 2"
FT /evidence="ECO:0000256|HAMAP-Rule:MF_00439"
FT REPEAT 120..153
FT /note="TPR 3"
FT /evidence="ECO:0000256|HAMAP-Rule:MF_00439"
SQ SEQUENCE 169 AA; 19544 MW; DC105DE4C4466209 CRC64;
MPRSQRNDNF IDKTFTIVAD ILLRIIPMAP GEKEAFTYYR DXXXXXSEGE YAEALQNYYE
AMRLETDPYD RSYILYNIGL VHTSNGEHTK ALEYYFQALE RNPSLPQALN NTALICHYRG
EQAIRQGDPE TAEAWFDQAA EYWEQAIALA PGNYIEAQNW LKITGRFGE
//
