ID D2HIQ9_AILME Unreviewed; 455 AA.
AC D2HIQ9;
DT 09-FEB-2010, integrated into UniProtKB/TrEMBL.
DT 09-FEB-2010, sequence version 1.
DT 03-MAY-2023, entry version 73.
DE RecName: Full=IF rod domain-containing protein {ECO:0000259|PROSITE:PS51842};
DE Flags: Fragment;
GN ORFNames=PANDA_011122 {ECO:0000313|EMBL:EFB20095.1};
OS Ailuropoda melanoleuca (Giant panda).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda.
OX NCBI_TaxID=9646 {ECO:0000313|EMBL:EFB20095.1};
RN [1] {ECO:0000313|EMBL:EFB20095.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=20010809; DOI=10.1038/nature08696;
RA Li R., Fan W., Tian G., Zhu H., He L., Cai J., Huang Q., Cai Q., Li B.,
RA Bai Y., Zhang Z., Zhang Y., Wang W., Li J., Wei F., Li H., Jian M., Li J.,
RA Zhang Z., Nielsen R., Li D., Gu W., Yang Z., Xuan Z., Ryder O.A.,
RA Leung F.C., Zhou Y., Cao J., Sun X., Fu Y., Fang X., Guo X., Wang B.,
RA Hou R., Shen F., Mu B., Ni P., Lin R., Qian W., Wang G., Yu C., Nie W.,
RA Wang J., Wu Z., Liang H., Min J., Wu Q., Cheng S., Ruan J., Wang M.,
RA Shi Z., Wen M., Liu B., Ren X., Zheng H., Dong D., Cook K., Shan G.,
RA Zhang H., Kosiol C., Xie X., Lu Z., Zheng H., Li Y., Steiner C.C.,
RA Lam T.T., Lin S., Zhang Q., Li G., Tian J., Gong T., Liu H., Zhang D.,
RA Fang L., Ye C., Zhang J., Hu W., Xu A., Ren Y., Zhang G., Bruford M.W.,
RA Li Q., Ma L., Guo Y., An N., Hu Y., Zheng Y., Shi Y., Li Z., Liu Q.,
RA Chen Y., Zhao J., Qu N., Zhao S., Tian F., Wang X., Wang H., Xu L., Liu X.,
RA Vinar T., Wang Y., Lam T.W., Yiu S.M., Liu S., Zhang H., Li D., Huang Y.,
RA Wang X., Yang G., Jiang Z., Wang J., Qin N., Li L., Li J., Bolund L.,
RA Kristiansen K., Wong G.K., Olson M., Zhang X., Li S., Yang H., Wang J.,
RA Wang J.;
RT "The sequence and de novo assembly of the giant panda genome.";
RL Nature 463:311-317(2010).
CC -!- SIMILARITY: Belongs to the intermediate filament family.
CC {ECO:0000256|RuleBase:RU000685}.
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DR EMBL; GL192892; EFB20095.1; -; Genomic_DNA.
DR RefSeq; XP_002922158.1; XM_002922112.3.
DR AlphaFoldDB; D2HIQ9; -.
DR STRING; 9646.ENSAMEP00000005764; -.
DR GeneID; 100464423; -.
DR KEGG; aml:100464423; -.
DR CTD; 3886; -.
DR eggNOG; ENOG502QQY9; Eukaryota.
DR HOGENOM; CLU_012560_8_0_1; -.
DR InParanoid; D2HIQ9; -.
DR OMA; SYRVASC; -.
DR OrthoDB; 4640531at2759; -.
DR TreeFam; TF332742; -.
DR GO; GO:0005882; C:intermediate filament; IEA:UniProtKB-KW.
DR GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR Gene3D; 1.20.5.170; -; 1.
DR Gene3D; 1.20.5.500; Single helix bin; 1.
DR Gene3D; 1.20.5.1160; Vasodilator-stimulated phosphoprotein; 1.
DR InterPro; IPR018039; IF_conserved.
DR InterPro; IPR039008; IF_rod_dom.
DR InterPro; IPR002957; Keratin_I.
DR PANTHER; PTHR23239; INTERMEDIATE FILAMENT; 1.
DR PANTHER; PTHR23239:SF193; KERATIN, TYPE I CUTICULAR HA5; 1.
DR Pfam; PF00038; Filament; 1.
DR PRINTS; PR01248; TYPE1KERATIN.
DR SMART; SM01391; Filament; 1.
DR SUPFAM; SSF64593; Intermediate filament protein, coiled coil region; 2.
DR SUPFAM; SSF46579; Prefoldin; 1.
DR PROSITE; PS00226; IF_ROD_1; 1.
DR PROSITE; PS51842; IF_ROD_2; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054, ECO:0000256|SAM:Coils};
KW Intermediate filament {ECO:0000256|ARBA:ARBA00022754,
KW ECO:0000256|RuleBase:RU000685}.
FT DOMAIN 97..408
FT /note="IF rod"
FT /evidence="ECO:0000259|PROSITE:PS51842"
FT COILED 101..135
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 207..245
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 306..407
FT /evidence="ECO:0000256|SAM:Coils"
FT NON_TER 455
FT /evidence="ECO:0000313|EMBL:EFB20095.1"
SQ SEQUENCE 455 AA; 50442 MW; 1A1872D1C701DED9 CRC64;
MASKCLKTSF SSASLKGLGG AGGGSTRVSA MYSSSSCKLP SLSRGARSFS ACSVGLGRSS
CRAASCLPAL CLPSGGFATS YSLGGGWFGE GILTGSEKET MQSLNDRLAS YLEKVRQLER
ENAELESRIR EWCQQQVPYL CPDYQSYFRT IEELQKKTLG TKAENARLVV QIDNAKLAAD
DFRTKYETEL SMRQLVESDM NGLRRILDDL TLCKSDLEAQ VESLKEELLC LKKNHEEEVN
SLRCQLGDRL NVEVDAAPPV DLNRVLDEMR CQYETLVENN RRDAEEWFNT QTEELNQQVV
SSSEQLQTCQ AEIIELRRTV NGLEIELQAQ QSMRDALEST LAETEGRYGS QLAQMQHLIG
NVESQLAEIR SDLERQNQEY QVLLDVRARL ECEINTYRGL LESEEGKLPC NPCAPDHSPT
KSCLPCLPAV SCSPAAVRTT CSPRPICVPG PGGRF
//
