ID D2PSF2_KRIFD Unreviewed; 1321 AA.
AC D2PSF2;
DT 02-MAR-2010, integrated into UniProtKB/TrEMBL.
DT 02-MAR-2010, sequence version 1.
DT 27-MAR-2024, entry version 60.
DE SubName: Full=Ricin B lectin {ECO:0000313|EMBL:ADB33090.1};
GN OrderedLocusNames=Kfla_4041 {ECO:0000313|EMBL:ADB33090.1};
OS Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).
OC Bacteria; Actinomycetota; Actinomycetes; Propionibacteriales;
OC Kribbellaceae; Kribbella.
OX NCBI_TaxID=479435 {ECO:0000313|EMBL:ADB33090.1, ECO:0000313|Proteomes:UP000007967};
RN [1] {ECO:0000313|Proteomes:UP000007967}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 17836 / JCM 10339 / NBRC 14399
RC {ECO:0000313|Proteomes:UP000007967};
RG US DOE Joint Genome Institute (JGI-PGF);
RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N.,
RA Saunders E., Brettin T., Detter J.C., Han C., Larimer F., Land M.,
RA Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D.,
RA Pukall R., Klenk H.-P., Eisen J.A.;
RT "The complete genome of Kribbella flavida DSM 17836.";
RL Submitted (SEP-2009) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ADB33090.1, ECO:0000313|Proteomes:UP000007967}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 17836 / JCM 10339 / NBRC 14399
RC {ECO:0000313|Proteomes:UP000007967};
RX PubMed=21304701;
RA Pukall R., Lapidus A., Glavina Del Rio T., Copeland A., Tice H.,
RA Cheng J.-F., Lucas S., Chen F., Nolan M., LaButti K., Pati A., Ivanova N.,
RA Mavrommatis K., Mikhailova N., Pitluck S., Bruce D., Goodwin L., Land M.,
RA Hauser L., Chang Y.-J., Jeffries C.D., Chen A., Palaniappan K., Chain P.,
RA Rohde M., Goeker M., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P.,
RA Kyrpides N.C., Klenk H.-P., Brettin T.;
RT "Complete genome sequence of Kribbella flavida type strain (IFO 14399).";
RL Stand. Genomic Sci. 2:186-193(2010).
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DR EMBL; CP001736; ADB33090.1; -; Genomic_DNA.
DR STRING; 479435.Kfla_4041; -.
DR CAZy; CBM13; Carbohydrate-Binding Module Family 13.
DR KEGG; kfl:Kfla_4041; -.
DR eggNOG; COG0791; Bacteria.
DR eggNOG; COG3209; Bacteria.
DR eggNOG; COG3507; Bacteria.
DR HOGENOM; CLU_259832_0_0_11; -.
DR Proteomes; UP000007967; Chromosome.
DR GO; GO:0030246; F:carbohydrate binding; IEA:UniProtKB-KW.
DR GO; GO:0006955; P:immune response; IEA:InterPro.
DR CDD; cd00161; RICIN; 2.
DR Gene3D; 2.40.128.340; -; 3.
DR Gene3D; 2.80.10.50; -; 2.
DR InterPro; IPR013517; FG-GAP.
DR InterPro; IPR028994; Integrin_alpha_N.
DR InterPro; IPR042837; PTX3.
DR InterPro; IPR035992; Ricin_B-like_lectins.
DR InterPro; IPR000772; Ricin_B_lectin.
DR PANTHER; PTHR46943; PENTRAXIN-RELATED PROTEIN PTX3; 1.
DR PANTHER; PTHR46943:SF1; PENTRAXIN-RELATED PROTEIN PTX3; 1.
DR Pfam; PF13517; FG-GAP_3; 1.
DR Pfam; PF14200; RicinB_lectin_2; 3.
DR SMART; SM00458; RICIN; 2.
DR SUPFAM; SSF69318; Integrin alpha N-terminal domain; 1.
DR SUPFAM; SSF50370; Ricin B-like lectins; 2.
DR PROSITE; PS50231; RICIN_B_LECTIN; 2.
PE 4: Predicted;
KW Lectin {ECO:0000313|EMBL:ADB33090.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000007967};
KW Signal {ECO:0000256|ARBA:ARBA00022729, ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..29
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 30..1321
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5039572001"
FT DOMAIN 1024..1169
FT /note="Ricin B lectin"
FT /evidence="ECO:0000259|SMART:SM00458"
FT DOMAIN 1183..1319
FT /note="Ricin B lectin"
FT /evidence="ECO:0000259|SMART:SM00458"
FT REGION 30..71
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1321 AA; 140615 MW; 7454DBCDE1329F8C CRC64;
MRRPGSLRTL AVSAALLLLP LGLTGAPAAA DPAVAPTPAV EQRPLQGPLQ GPAADARRTG
KPVEVEGSRT ETSQVFVNPN GHHTLVQHAQ AVRVRTAKGW APVDHTLRFG AGGKVRPAMS
GTGLELSGGG PGADLVALGT KNARVRLGWP GQLPRPVLQG PVATYGEVLP GVDLQLRAEP
AGFTKVLVVK NRAAALNPAL RQLEFPVRGE GLTIKATSGG RTVATDRKGR TVFSSGQALM
WDAAKRTSAM PVKHSGGVLT VVPDQRLLTS PDTKFPLLID PPWTSFVGDL WTHVNQEHPT
TPYWDYDRGD GAKVGSAWGP DRDVYRSLFQ LGTTGLAGAR IIDAKFSITL WHTPSSTPTP
VQLWHTRPIS RAESVTWNST GNHWLQHVAT ASGAARGTDF AMGFMTPELE AIVQGAADRR
EPSITLGLRA PDESLTVEGP GERQWKKFRA GTAALVVTYN TPPRMPIRVN FTSPRPCGTQ
AAPTVIGTVT PQFSAVVSDP DGDNVSNRLE IARWPENTSA HLQDSPLTGS GTAFSWSAVP
AGQLVDGGTY FYTARSDDKV ADDGVTFGPF SAPCFFRIDV KAPGRPTIAS TDFPSGLPGR
PAREVGILNL SPASGDTDVA EYRYGFLRSK LTLRVKARPD GTAALPMTVP SSSRTLFVRA
VDHAGTAGDP SEWKLIARAN PNKYKVRGDV NGDGAADVNL VLDHGAGLTR VWNLTSKDGS
FTNATVAWDS DNSGGFALSR TRPVQGDFTG DGRADLAMFR DEPGHRVGLY LLISDGDRYD
ALSGPVWSRA TPGWTVVSAR VAAGDVTGDG LADIVLQLNT GNGNWQVMVY PGGNLGAPVQ
WVQTAPGSGE WVHSKIVVGD TDGDQVDDLV VLKKTAACTT VIDTYRSTRN GFEAPSAVFA
GDYCLDKGNP AAGDVDADGK DDLVTIYDDS SSTRLRVFHS TGAGLALQDW WTGDGWDAVR
SVLQVGDYDK DGKDDVALVS ALTGGGREAF QLRSTGTAFS APVSGWKEPK VGASTAPPFD
LEARTYELVA RHSGRCMEVE AGGQTGTPVF QQWDCYGGLH QRFRIVPVAG TEQYELHPAH
ANGGNGLKCL DVANASSADE AAIVQATCQG TGNQQVLLEY VEGSSYDAVF RIKFAHSGKC
GGISGGVANG GNLVQRACAE LADQQWVVRA ALNSPQLDGR YKIRTMTTIN DSQRDYVLDL
TNCDGSNAVR VGNWSNAECQ RWQLKPLGDD VYQIVDPASQ KAIQVAGCSQ LRGGQVVAFD
LDASECQTWR VEPAADGSHT IQQTESGMVL DVPGCVDTTT TSMNVWEYWQ GACQRWKLTS
S
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