ID D2VBL5_NAEGR Unreviewed; 83 AA.
AC D2VBL5;
DT 02-MAR-2010, integrated into UniProtKB/TrEMBL.
DT 02-MAR-2010, sequence version 1.
DT 27-MAR-2024, entry version 43.
DE SubName: Full=Predicted protein {ECO:0000313|EMBL:EFC45930.1};
DE Flags: Fragment;
GN ORFNames=NAEGRDRAFT_4357 {ECO:0000313|EMBL:EFC45930.1};
OS Naegleria gruberi (Amoeba).
OC Eukaryota; Discoba; Heterolobosea; Tetramitia; Eutetramitia;
OC Vahlkampfiidae; Naegleria.
OX NCBI_TaxID=5762 {ECO:0000313|Proteomes:UP000006671};
RN [1] {ECO:0000313|EMBL:EFC45930.1, ECO:0000313|Proteomes:UP000006671}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NEG-M {ECO:0000313|EMBL:EFC45930.1,
RC ECO:0000313|Proteomes:UP000006671};
RX PubMed=20211133; DOI=10.1016/j.cell.2010.01.032;
RA Fritz-Laylin L.K., Prochnik S.E., Ginger M.L., Dacks J.B., Carpenter M.L.,
RA Field M.C., Kuo A., Paredez A., Chapman J., Pham J., Shu S., Neupane R.,
RA Cipriano M., Mancuso J., Tu H., Salamov A., Lindquist E., Shapiro H.,
RA Lucas S., Grigoriev I.V., Cande W.Z., Fulton C., Rokhsar D.S., Dawson S.C.;
RT "The genome of Naegleria gruberi illuminates early eukaryotic
RT versatility.";
RL Cell 140:631-642(2010).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the snRNP SmB/SmN family.
CC {ECO:0000256|ARBA:ARBA00009123}.
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DR EMBL; GG738861; EFC45930.1; -; Genomic_DNA.
DR RefSeq; XP_002678674.1; XM_002678628.1.
DR AlphaFoldDB; D2VBL5; -.
DR STRING; 5762.D2VBL5; -.
DR EnsemblProtists; EFC45930; EFC45930; NAEGRDRAFT_4357.
DR GeneID; 8859116; -.
DR VEuPathDB; AmoebaDB:NAEGRDRAFT_4357; -.
DR eggNOG; KOG3168; Eukaryota.
DR InParanoid; D2VBL5; -.
DR OMA; MLHNINR; -.
DR OrthoDB; 5475294at2759; -.
DR Proteomes; UP000006671; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR CDD; cd01717; Sm_B; 1.
DR Gene3D; 2.30.30.100; -; 1.
DR InterPro; IPR010920; LSM_dom_sf.
DR InterPro; IPR047575; Sm.
DR InterPro; IPR001163; Sm_dom_euk/arc.
DR PANTHER; PTHR10701:SF0; SMALL NUCLEAR RIBONUCLEOPROTEIN-ASSOCIATED PROTEIN B; 1.
DR PANTHER; PTHR10701; SMALL NUCLEAR RIBONUCLEOPROTEIN-ASSOCIATED PROTEIN B AND N; 1.
DR Pfam; PF01423; LSM; 1.
DR SMART; SM00651; Sm; 1.
DR SUPFAM; SSF50182; Sm-like ribonucleoproteins; 1.
DR PROSITE; PS52002; SM; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000006671};
KW Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274}.
FT DOMAIN 1..82
FT /note="Sm"
FT /evidence="ECO:0000259|PROSITE:PS52002"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:EFC45930.1"
FT NON_TER 83
FT /evidence="ECO:0000313|EMBL:EFC45930.1"
SQ SEQUENCE 83 AA; 9576 MW; F6F156E9F06B402C CRC64;
KNSKLYQFLN YRMRITLQDG RQIVGKFMAF DKFMNLVVAD CEEFRKIIPK GSKGEEVEQK
RSLGFLLIRG ENIISIVVEG PPP
//
