ID   D3LQ87_MICLU            Unreviewed;       416 AA.
AC   D3LQ87;
DT   20-APR-2010, integrated into UniProtKB/TrEMBL.
DT   20-APR-2010, sequence version 1.
DT   24-JAN-2024, entry version 46.
DE   SubName: Full=Putative ribonuclease D {ECO:0000313|EMBL:EFD50402.1};
GN   ORFNames=HMPREF0569_2457 {ECO:0000313|EMBL:EFD50402.1};
OS   Micrococcus luteus SK58.
OC   Bacteria; Actinomycetota; Actinomycetes; Micrococcales; Micrococcaceae;
OC   Micrococcus.
OX   NCBI_TaxID=596312 {ECO:0000313|EMBL:EFD50402.1, ECO:0000313|Proteomes:UP000002933};
RN   [1] {ECO:0000313|EMBL:EFD50402.1, ECO:0000313|Proteomes:UP000002933}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=SK58 {ECO:0000313|EMBL:EFD50402.1,
RC   ECO:0000313|Proteomes:UP000002933};
RA   Madupu R., Durkin A.S., Torralba M., Methe B., Sutton G.G.,
RA   Strausberg R.L., Nelson K.E.;
RL   Submitted (NOV-2009) to the EMBL/GenBank/DDBJ databases.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:EFD50402.1}.
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DR   EMBL; ADCD01000075; EFD50402.1; -; Genomic_DNA.
DR   RefSeq; WP_002857082.1; NZ_ADCD01000075.1.
DR   AlphaFoldDB; D3LQ87; -.
DR   Proteomes; UP000002933; Unassembled WGS sequence.
DR   GO; GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0000166; F:nucleotide binding; IEA:InterPro.
DR   GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
DR   CDD; cd06142; RNaseD_exo; 1.
DR   Gene3D; 1.10.150.80; HRDC domain; 2.
DR   Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR   InterPro; IPR002562; 3'-5'_exonuclease_dom.
DR   InterPro; IPR041605; Exo_C.
DR   InterPro; IPR010997; HRDC-like_sf.
DR   InterPro; IPR002121; HRDC_dom.
DR   InterPro; IPR044876; HRDC_dom_sf.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR036397; RNaseH_sf.
DR   PANTHER; PTHR47649; RIBONUCLEASE D; 1.
DR   PANTHER; PTHR47649:SF1; RIBONUCLEASE D; 1.
DR   Pfam; PF01612; DNA_pol_A_exo1; 1.
DR   Pfam; PF18305; DNA_pol_A_exoN; 1.
DR   Pfam; PF00570; HRDC; 1.
DR   SMART; SM00474; 35EXOc; 1.
DR   SMART; SM00341; HRDC; 1.
DR   SUPFAM; SSF47819; HRDC-like; 1.
DR   SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR   PROSITE; PS50967; HRDC; 1.
PE   4: Predicted;
FT   DOMAIN          230..310
FT                   /note="HRDC"
FT                   /evidence="ECO:0000259|PROSITE:PS50967"
FT   REGION          207..228
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          307..332
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   416 AA;  44667 MW;  5A7860D8CE4114DE CRC64;
     MTDAPETAAP DTPPRLIATP AGGVPRLTDT RAGLEACAAA LAAGTGPVAV DAERASGIRY
     GQRAMLVQLK REGAGIWLVD PEALDGLAPL QEALAGVEWI LHAASQDLPC LAEQGLRPDR
     LFDTELAARV AGLPRVGLAA VLEELLGVTL AKEHSAADWS VRPLPEAMLA YAALDVELLV
     PLREALIARL EADGKLAWAE QEFEHVRTAP PPAPKKHPWR GTSGSQTLRR PVQRAVLKRL
     WEAREDLARH RDVAPGRLIP DRSIVAAAAA LPRTVPALRQ TSGFHGRAAS REAPRWIAAI
     RAGVEDAERG DAPAAQIRTG DGPPPPRAWK DRDPVADRRL RTAKARVARR AEELGMPTEN
     LLTPDTLRRI CWTPPAPITP ETVDAFLTER GARPWQVENV GAIVTVALLD PDPADA
//