ID D3VWP9_9FLOR Unreviewed; 337 AA.
AC D3VWP9;
DT 20-APR-2010, integrated into UniProtKB/TrEMBL.
DT 20-APR-2010, sequence version 1.
DT 24-JAN-2024, entry version 33.
DE RecName: Full=DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00012418};
DE EC=2.7.7.6 {ECO:0000256|ARBA:ARBA00012418};
DE Flags: Fragment;
GN Name=RPB1 {ECO:0000313|EMBL:ADD52219.1};
OS Corallophila eatoniana.
OC Eukaryota; Rhodophyta; Florideophyceae; Rhodymeniophycidae; Ceramiales;
OC Ceramiaceae; Corallophila.
OX NCBI_TaxID=326255 {ECO:0000313|EMBL:ADD52219.1};
RN [1] {ECO:0000313|EMBL:ADD52219.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=AC270 {ECO:0000313|EMBL:ADD52219.1};
RA Carlile A.L., Waaland J.R.;
RT "Phylogenetic lineages in the tribe Ceramieae (Ceramiaceae, Rhodophyta) and
RT evolution of morphological characters.";
RL Submitted (JUN-2009) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC EC=2.7.7.6; Evidence={ECO:0000256|ARBA:ARBA00024550};
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DR EMBL; GQ252516; ADD52219.1; -; Genomic_DNA.
DR AlphaFoldDB; D3VWP9; -.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-EC.
DR GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR Gene3D; 1.10.132.30; -; 1.
DR Gene3D; 2.40.40.20; -; 1.
DR Gene3D; 6.10.250.2940; -; 1.
DR Gene3D; 1.10.274.100; RNA polymerase Rpb1, domain 3; 1.
DR InterPro; IPR045867; DNA-dir_RpoC_beta_prime.
DR InterPro; IPR000722; RNA_pol_asu.
DR InterPro; IPR007066; RNA_pol_Rpb1_3.
DR InterPro; IPR042102; RNA_pol_Rpb1_3_sf.
DR InterPro; IPR007083; RNA_pol_Rpb1_4.
DR InterPro; IPR038120; Rpb1_funnel_sf.
DR PANTHER; PTHR19376; DNA-DIRECTED RNA POLYMERASE; 1.
DR PANTHER; PTHR19376:SF37; DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1; 1.
DR Pfam; PF00623; RNA_pol_Rpb1_2; 1.
DR Pfam; PF04983; RNA_pol_Rpb1_3; 1.
DR Pfam; PF05000; RNA_pol_Rpb1_4; 1.
DR SUPFAM; SSF64484; beta and beta-prime subunits of DNA dependent RNA-polymerase; 1.
PE 4: Predicted;
KW DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478};
KW Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT DOMAIN 1..24
FT /note="RNA polymerase alpha subunit"
FT /evidence="ECO:0000259|Pfam:PF00623"
FT DOMAIN 27..190
FT /note="RNA polymerase Rpb1"
FT /evidence="ECO:0000259|Pfam:PF04983"
FT DOMAIN 220..322
FT /note="RNA polymerase Rpb1"
FT /evidence="ECO:0000259|Pfam:PF05000"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:ADD52219.1"
FT NON_TER 337
FT /evidence="ECO:0000313|EMBL:ADD52219.1"
SQ SEQUENCE 337 AA; 37205 MW; D6C4F987A450CFA7 CRC64;
GDEMNMHVPQ THQTRAEVQE LMLVPHCIVS PQANKPVMGI VQDTLLGCSL FTRRDTFLER
DLVMNLLMHV GDWDGIVPQP TILKPKPLWT GKQIFSLILP PVNLIKKSGQ FDEKPDRTDI
TAYDTKVYIL KGQLITGIVC KKTVGSSSGG LIHTTWKELG PRDSDKLISQ IQVLVNHYVL
QRGNSIGIGD SIADSKTMGN VITIIEDAKT QVKELVRKAQ EKSLGLLPGK DLMETFEGRV
NTALNKARDD SGKTAESSLP TSNNIKRMVS AGSKGSFINI SQICACVGQQ NVEGQRISYG
FNRRTLPHFV VDDLGPESRG FVENSYLRGL TPSEFFS
//
