GenomeNet

Database: UniProt
Entry: D4A9T0_RAT
LinkDB: D4A9T0_RAT
Original site: D4A9T0_RAT 
ID   D4A9T0_RAT              Unreviewed;      1200 AA.
AC   D4A9T0;
DT   20-APR-2010, integrated into UniProtKB/TrEMBL.
DT   20-APR-2010, sequence version 1.
DT   27-MAR-2024, entry version 104.
DE   SubName: Full=Cask-interacting protein 2 {ECO:0000313|Ensembl:ENSRNOP00000005942.4};
GN   Name=Caskin2 {ECO:0000313|Ensembl:ENSRNOP00000005942.4,
GN   ECO:0000313|RGD:1309738};
OS   Rattus norvegicus (Rat).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC   Murinae; Rattus.
OX   NCBI_TaxID=10116 {ECO:0000313|Ensembl:ENSRNOP00000005942.4, ECO:0000313|Proteomes:UP000002494};
RN   [1] {ECO:0000313|Ensembl:ENSRNOP00000005942.4, ECO:0000313|Proteomes:UP000002494}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Brown Norway {ECO:0000313|Ensembl:ENSRNOP00000005942.4,
RC   ECO:0000313|Proteomes:UP000002494};
RX   PubMed=15057822; DOI=10.1038/nature02426;
RG   Rat Genome Sequencing Project Consortium;
RA   Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J.,
RA   Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G.,
RA   Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G.,
RA   Morgan M., Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G.,
RA   Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S.,
RA   Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T.,
RA   Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D.,
RA   Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L.,
RA   Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D.,
RA   Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M.,
RA   Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C.,
RA   Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J.,
RA   Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H.,
RA   Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X.,
RA   Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q.,
RA   Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P.,
RA   Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A.,
RA   Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C.,
RA   Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J.,
RA   Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J.,
RA   Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F.,
RA   Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A.,
RA   Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A.,
RA   Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J.,
RA   Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E.,
RA   Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M.,
RA   Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C.,
RA   Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L.,
RA   Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W.,
RA   Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y.,
RA   Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V.,
RA   Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M.,
RA   Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S.,
RA   Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B.,
RA   Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R.,
RA   Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J.,
RA   Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D.,
RA   Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S.,
RA   Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S.,
RA   Mockrin S., Collins F.S.;
RT   "Genome sequence of the Brown Norway rat yields insights into mammalian
RT   evolution.";
RL   Nature 428:493-521(2004).
RN   [2] {ECO:0007829|PubMed:22673903}
RP   IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RX   PubMed=22673903;
RA   Lundby A., Secher A., Lage K., Nordsborg N.B., Dmytriyev A., Lundby C.,
RA   Olsen J.V.;
RT   "Quantitative maps of protein phosphorylation sites across 14 different rat
RT   organs and tissues.";
RL   Nat. Commun. 3:876-876(2012).
RN   [3] {ECO:0000313|Ensembl:ENSRNOP00000005942.4}
RP   IDENTIFICATION.
RC   STRAIN=Brown Norway {ECO:0000313|Ensembl:ENSRNOP00000005942.4};
RG   Ensembl;
RL   Submitted (NOV-2023) to UniProtKB.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
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DR   RefSeq; NP_001100535.1; NM_001107065.1.
DR   RefSeq; XP_006247779.1; XM_006247717.3.
DR   AlphaFoldDB; D4A9T0; -.
DR   SMR; D4A9T0; -.
DR   STRING; 10116.ENSRNOP00000005942; -.
DR   PhosphoSitePlus; D4A9T0; -.
DR   PaxDb; 10116-ENSRNOP00000005942; -.
DR   Ensembl; ENSRNOT00000005942.6; ENSRNOP00000005942.4; ENSRNOG00000004310.7.
DR   GeneID; 303678; -.
DR   KEGG; rno:303678; -.
DR   AGR; RGD:1309738; -.
DR   CTD; 57513; -.
DR   RGD; 1309738; Caskin2.
DR   eggNOG; KOG0507; Eukaryota.
DR   GeneTree; ENSGT00940000158256; -.
DR   HOGENOM; CLU_003619_2_0_1; -.
DR   OMA; PRCKERE; -.
DR   OrthoDB; 25046at2759; -.
DR   TreeFam; TF320582; -.
DR   Proteomes; UP000002494; Chromosome 10.
DR   Bgee; ENSRNOG00000004310; Expressed in lung and 18 other cell types or tissues.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   CDD; cd09497; SAM_caskin1_2_repeat1; 1.
DR   CDD; cd09498; SAM_caskin1_2_repeat2; 1.
DR   CDD; cd12063; SH3_Caskin2; 1.
DR   Gene3D; 1.25.40.20; Ankyrin repeat-containing domain; 3.
DR   Gene3D; 2.30.30.40; SH3 Domains; 1.
DR   Gene3D; 1.10.150.50; Transcription Factor, Ets-1; 2.
DR   InterPro; IPR033635; ANKS1/Caskin.
DR   InterPro; IPR002110; Ankyrin_rpt.
DR   InterPro; IPR036770; Ankyrin_rpt-contain_sf.
DR   InterPro; IPR032232; Caskin1-CID.
DR   InterPro; IPR035497; Caskin1/2_SAM_1.
DR   InterPro; IPR035498; Caskin1/2_SAM_2.
DR   InterPro; IPR035499; Caskin2_SH3.
DR   InterPro; IPR032117; Caskin_C.
DR   InterPro; IPR001660; SAM.
DR   InterPro; IPR013761; SAM/pointed_sf.
DR   InterPro; IPR036028; SH3-like_dom_sf.
DR   InterPro; IPR001452; SH3_domain.
DR   PANTHER; PTHR24174; ANKYRIN REPEAT AND STERILE ALPHA MOTIF DOMAIN-CONTAINING PROTEIN 1; 1.
DR   PANTHER; PTHR24174:SF18; CASKIN-2; 1.
DR   Pfam; PF12796; Ank_2; 2.
DR   Pfam; PF13637; Ank_4; 1.
DR   Pfam; PF16907; Caskin-Pro-rich; 1.
DR   Pfam; PF16632; Caskin-tail; 1.
DR   Pfam; PF16600; Caskin1-CID; 1.
DR   Pfam; PF00536; SAM_1; 2.
DR   Pfam; PF07653; SH3_2; 1.
DR   PRINTS; PR01415; ANKYRIN.
DR   SMART; SM00248; ANK; 7.
DR   SMART; SM00454; SAM; 2.
DR   SMART; SM00326; SH3; 1.
DR   SUPFAM; SSF48403; Ankyrin repeat; 1.
DR   SUPFAM; SSF47769; SAM/Pointed domain; 2.
DR   SUPFAM; SSF50044; SH3-domain; 1.
DR   PROSITE; PS50297; ANK_REP_REGION; 5.
DR   PROSITE; PS50088; ANK_REPEAT; 5.
DR   PROSITE; PS50105; SAM_DOMAIN; 2.
DR   PROSITE; PS50002; SH3; 1.
PE   1: Evidence at protein level;
KW   Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW   Reference proteome {ECO:0000313|Proteomes:UP000002494};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737};
KW   SH3 domain {ECO:0000256|ARBA:ARBA00022443}.
SQ   SEQUENCE   1200 AA;  126984 MW;  5C6F5872C1904B4C CRC64;
     MGREQDLILA VKNGDVTCVQ KLVAKVKAAK TKLLGSTKRL NINYQDADGF SALHHAALGG
     SLELIALLLE AQATVDIKDS NGMRPLHYAA WQGRLEPVKL LLRASAAVNA ASLDGQIPLH
     LAAQYGHYEV SEMLLQHQSN PCLVNKLKKT PLDLACEFGR LKVAQLLLNS HLCVALLEGE
     AKDPCDPNYT TPLHLAAKNG HREVIRQLLK AGIEINRQTK TGTALHEAAL YGKTEVVRLL
     LEGGVDVNIR NTYNQTALDI VNQFTTSQAS REIKQLLREA SGILKVRALK DFWNLHDPTA
     LNIRAGDVIT VLEQHPDGRW KGHIHESQRG TDRVGYFPPG IVEVVSKRVG IPVTRLPSAP
     TLLRPSFSRI SQPSADDPLP SLTYGQLPRV GLSPDSPAGD RNSVGSEGSV GSIRSAGSGQ
     SSEGTNGHST GLLIENAQPL PSANEDQVLP GLHAPSPADN LSHRPLASYR SGEIFTQDVR
     PEQLLEGKDA QAIHNWLSEF QLEGYTAHFL QAGYDVPTIS RMTPEDLTAI GVTKPGHRKK
     IASEIAQLSI AEWLPNYIPV DLLEWLCALG LPQYHKQLVS SGYDSMGLVA DLTWEELQEI
     GVNKLGHQKK LMLGVKRLAE LRRGLLHGEA LGEGGRRMTR GPELMAIEGL ENGDSPATAG
     PRLLTFQGSE LSPELQAAMA GGGPEPLPLP PARSPSQESI GARSRGSGHS QGQPGSQPNA
     GEPSAPQERN LPEGTERPFK PCSPLPGQGP APYVFMCPQS LPSSPAPAPP PGVPRAFSYL
     AGSSAAPPDP PRPKRRSHSL SRPGPAEGEA EGEAEGPVGS ALGSYATLTR RPGRSTLART
     SPSLTPTRGT PRSQSFALRA RRKGPPPPPP KRLSSVSGST EPTSLEGTSG PKEGAAGPRR
     RTLSEPTGPS ESPAPSAPTG PVSDTEEEEP VLEGTPPSRG SSGEGLPFAE EGNLTIKQRP
     KPAGPPPRET TVPPGLDFNL TESDTVKRRP KCKEREPLRT ALLAFGVVGS DTPGPSTPLS
     SQAPCEAPSA PSNPPRSEPS SLPSQEAPAP LSPVTQPPGH PGPSAGPGLE TSTGSRQNVD
     TEPPAPPAAL LKVPGAGTAP KPVSVACTQL AFSGPKLAPR LGPRPVPPPR PENTGPVCPG
     RAQQRLEQTS SSLEAALRAA EKNIGSEEQD GPTGPSTKHI LDDISTMFDA LADQLDAMLD
//
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