GenomeNet

Database: UniProt
Entry: D4BNH0_BIFBR
LinkDB: D4BNH0_BIFBR
Original site: D4BNH0_BIFBR 
ID   D4BNH0_BIFBR            Unreviewed;       292 AA.
AC   D4BNH0;
DT   18-MAY-2010, integrated into UniProtKB/TrEMBL.
DT   18-MAY-2010, sequence version 1.
DT   27-MAR-2024, entry version 55.
DE   SubName: Full=RNA methyltransferase, TrmH family {ECO:0000313|EMBL:EFE89207.1};
GN   ORFNames=BIFBRE_03620 {ECO:0000313|EMBL:EFE89207.1};
OS   Bifidobacterium breve DSM 20213 = JCM 1192.
OC   Bacteria; Actinomycetota; Actinomycetes; Bifidobacteriales;
OC   Bifidobacteriaceae; Bifidobacterium.
OX   NCBI_TaxID=518634 {ECO:0000313|EMBL:EFE89207.1, ECO:0000313|Proteomes:UP000003191};
RN   [1] {ECO:0000313|EMBL:EFE89207.1, ECO:0000313|Proteomes:UP000003191}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 20213 {ECO:0000313|EMBL:EFE89207.1,
RC   ECO:0000313|Proteomes:UP000003191};
RA   Weinstock G., Sodergren E., Clifton S., Fulton L., Fulton B., Courtney L.,
RA   Fronick C., Harrison M., Strong C., Farmer C., Delahaunty K., Markovic C.,
RA   Hall O., Minx P., Tomlinson C., Mitreva M., Nelson J., Hou S., Wollam A.,
RA   Pepin K.H., Johnson M., Bhonagiri V., Zhang X., Suruliraj S., Warren W.,
RA   Chinwalla A., Mardis E.R., Wilson R.K.;
RL   Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:EFE89207.1}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; ACCG02000009; EFE89207.1; -; Genomic_DNA.
DR   RefSeq; WP_003828782.1; NZ_JDUD01000004.1.
DR   AlphaFoldDB; D4BNH0; -.
DR   STRING; 1685.RY69_1317; -.
DR   KEGG; bbrd:BBBR_0626; -.
DR   PATRIC; fig|518634.20.peg.659; -.
DR   HOGENOM; CLU_021322_3_1_11; -.
DR   Proteomes; UP000003191; Unassembled WGS sequence.
DR   GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR   GO; GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
DR   GO; GO:0032259; P:methylation; IEA:UniProtKB-KW.
DR   GO; GO:0006396; P:RNA processing; IEA:InterPro.
DR   CDD; cd18095; SpoU-like_rRNA-MTase; 1.
DR   Gene3D; 3.30.1330.30; -; 1.
DR   Gene3D; 3.40.1280.10; -; 1.
DR   InterPro; IPR029028; Alpha/beta_knot_MTases.
DR   InterPro; IPR029064; Ribosomal_eL30-like_sf.
DR   InterPro; IPR001537; SpoU_MeTrfase.
DR   InterPro; IPR029026; tRNA_m1G_MTases_N.
DR   PANTHER; PTHR43191:SF16; RNA METHYLASE-RELATED; 1.
DR   PANTHER; PTHR43191; RRNA METHYLTRANSFERASE 3; 1.
DR   Pfam; PF00588; SpoU_methylase; 1.
DR   SUPFAM; SSF75217; alpha/beta knot; 1.
DR   SUPFAM; SSF55315; L30e-like; 1.
PE   4: Predicted;
KW   Methyltransferase {ECO:0000313|EMBL:EFE89207.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000003191};
KW   Transferase {ECO:0000313|EMBL:EFE89207.1}.
FT   DOMAIN          135..280
FT                   /note="tRNA/rRNA methyltransferase SpoU type"
FT                   /evidence="ECO:0000259|Pfam:PF00588"
SQ   SEQUENCE   292 AA;  31912 MW;  609D2B16FE7E40E1 CRC64;
     MPITPKILDN PKSDRVRRIT DLARAKGRER SGRFLIEGPQ SVREAVTWRP DVVQDLYVEV
     AQALDHPRIV SSTLERIVEA SQDATIYVHQ CTGDVIRRIS ADAQGILAVG NAQAMQSDVD
     DLALDTADYA PRIAAFWQVR DPGNAGTVIR AADAAGCDAV IFVDDCVDVL NPKVIRSTAG
     SLFHLPVFTM RTNEFFDWTS DHHVDVWAAD VYGTEKRKPE SLPAVLADKA AVSMSQAVLF
     GNEARGLEPE ILERCGRIVS IPLYGKAESL NLGTSAAVML MSLAMSGHIE RM
//
DBGET integrated database retrieval system