ID D4ZIJ3_SHEVD Unreviewed; 332 AA.
AC D4ZIJ3;
DT 15-JUN-2010, integrated into UniProtKB/TrEMBL.
DT 15-JUN-2010, sequence version 1.
DT 27-MAR-2024, entry version 74.
DE SubName: Full=Transcriptional regulator, LacI family {ECO:0000313|EMBL:BAJ01492.1};
GN OrderedLocusNames=SVI_1521 {ECO:0000313|EMBL:BAJ01492.1};
OS Shewanella violacea (strain JCM 10179 / CIP 106290 / LMG 19151 / DSS12).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales;
OC Shewanellaceae; Shewanella.
OX NCBI_TaxID=637905 {ECO:0000313|EMBL:BAJ01492.1, ECO:0000313|Proteomes:UP000002350};
RN [1] {ECO:0000313|Proteomes:UP000002350}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JCM 10179 / CIP 106290 / LMG 19151 / DSS12
RC {ECO:0000313|Proteomes:UP000002350};
RX PubMed=20458400; DOI=10.1039/c000396d;
RA Aono E., Baba T., Ara T., Nishi T., Nakamichi T., Inamoto E., Toyonaga H.,
RA Hasegawa M., Takai Y., Okumura Y., Baba M., Tomita M., Kato C., Oshima T.,
RA Nakasone K., Mori H.;
RT "Complete genome sequence and comparative analysis of Shewanella violacea,
RT a psychrophilic and piezophilic bacterium from deep sea floor sediments.";
RL Mol. Biosyst. 6:1216-1226(2010).
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DR EMBL; AP011177; BAJ01492.1; -; Genomic_DNA.
DR RefSeq; WP_013050800.1; NC_014012.1.
DR AlphaFoldDB; D4ZIJ3; -.
DR STRING; 637905.SVI_1521; -.
DR KEGG; svo:SVI_1521; -.
DR eggNOG; COG1609; Bacteria.
DR HOGENOM; CLU_037628_6_0_6; -.
DR OrthoDB; 9798934at2; -.
DR Proteomes; UP000002350; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd01392; HTH_LacI; 1.
DR CDD; cd06270; PBP1_GalS-like; 1.
DR Gene3D; 3.40.50.2300; -; 2.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR000843; HTH_LacI.
DR InterPro; IPR046335; LacI/GalR-like_sensor.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR028082; Peripla_BP_I.
DR PANTHER; PTHR30146:SF152; HTH-TYPE TRANSCRIPTIONAL REGULATOR EBGR-RELATED; 1.
DR PANTHER; PTHR30146; LACI-RELATED TRANSCRIPTIONAL REPRESSOR; 1.
DR Pfam; PF00356; LacI; 1.
DR Pfam; PF13377; Peripla_BP_3; 1.
DR PRINTS; PR00036; HTHLACI.
DR SMART; SM00354; HTH_LACI; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR SUPFAM; SSF53822; Periplasmic binding protein-like I; 1.
DR PROSITE; PS50932; HTH_LACI_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000002350};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 2..56
FT /note="HTH lacI-type"
FT /evidence="ECO:0000259|PROSITE:PS50932"
SQ SEQUENCE 332 AA; 36366 MW; D728EEBD910040C4 CRC64;
MATIYDVSVL AGVSLATVSR VMNKNTKVSE KTENKVLDAM KQLDYRPNAI AQSLASSRSN
SIGVLVSELH GPFYGAMMSG IEAELRTAKK HVIIAAGHSD EESEKEGIEF LIDRRCDALI
LHVEAVSDEY LIELSQGSTP IVLINRYIAE LKDSCIYLDN QLGGYLATKA MIESGHTALA
YISGPFWKVD TQARLAGYKQ ALAESGLEFD PSLVYEGDYL ETGGSRGFQA LMKAERSFTA
LVCANDEMAA GAMDAARQLN VEIPSQVSIV GFDNIILANY IYPKLSTINY PIAEMGHMAA
RWVLRNTYKN KSLSIKNMFN PALILRDSIS SL
//
