ID D5Q9K9_CLODI Unreviewed; 320 AA.
AC D5Q9K9;
DT 13-JUL-2010, integrated into UniProtKB/TrEMBL.
DT 13-JUL-2010, sequence version 1.
DT 27-MAR-2024, entry version 41.
DE SubName: Full=Sugar-binding domain protein {ECO:0000313|EMBL:EFH05436.1};
GN ORFNames=HMPREF0220_3593 {ECO:0000313|EMBL:EFH05436.1};
OS Clostridioides difficile NAP08.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Peptostreptococcaceae;
OC Clostridioides.
OX NCBI_TaxID=525259 {ECO:0000313|EMBL:EFH05436.1, ECO:0000313|Proteomes:UP000003227};
RN [1] {ECO:0000313|EMBL:EFH05436.1, ECO:0000313|Proteomes:UP000003227}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NAP08 {ECO:0000313|EMBL:EFH05436.1,
RC ECO:0000313|Proteomes:UP000003227};
RA Qin X., Bachman B., Battles P., Bell A., Bess C., Bickham C., Chaboub L.,
RA Chen D., Coyle M., Deiros D.R., Dinh H., Forbes L., Fowler G.,
RA Francisco L., Fu Q., Gubbala S., Hale W., Han Y., Hemphill L.,
RA Highlander S.K., Hirani K., Hogues M., Jackson L., Jakkamsetti A.,
RA Javaid M., Jiang H., Korchina V., Kovar C., Lara F., Lee S., Mata R.,
RA Mathew T., Moen C., Morales K., Munidasa M., Nazareth L., Ngo R.,
RA Nguyen L., Okwuonu G., Ongeri F., Patil S., Petrosino J., Pham C., Pham P.,
RA Pu L.-L., Puazo M., Raj R., Reid J., Rouhana J., Saada N., Shang Y.,
RA Simmons D., Thornton R., Warren J., Weissenberger G., Zhang J., Zhang L.,
RA Zhou C., Zhu D., Muzny D., Worley K., Gibbs R.;
RL Submitted (MAY-2010) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the bacterial solute-binding protein 2 family.
CC {ECO:0000256|ARBA:ARBA00007639}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EFH05436.1}.
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DR EMBL; ADNX01000099; EFH05436.1; -; Genomic_DNA.
DR RefSeq; WP_003421063.1; NZ_GG770715.1.
DR AlphaFoldDB; D5Q9K9; -.
DR HOGENOM; CLU_037628_3_3_9; -.
DR Proteomes; UP000003227; Unassembled WGS sequence.
DR GO; GO:0030246; F:carbohydrate binding; IEA:UniProt.
DR CDD; cd06322; PBP1_ABC_sugar_binding-like; 1.
DR Gene3D; 3.40.50.2300; -; 2.
DR InterPro; IPR028082; Peripla_BP_I.
DR InterPro; IPR025997; SBP_2_dom.
DR PANTHER; PTHR46847; D-ALLOSE-BINDING PERIPLASMIC PROTEIN-RELATED; 1.
DR PANTHER; PTHR46847:SF1; D-ALLOSE-BINDING PERIPLASMIC PROTEIN-RELATED; 1.
DR Pfam; PF13407; Peripla_BP_4; 1.
DR SUPFAM; SSF53822; Periplasmic binding protein-like I; 1.
DR PROSITE; PS51257; PROKAR_LIPOPROTEIN; 1.
PE 3: Inferred from homology;
FT DOMAIN 44..298
FT /note="Periplasmic binding protein"
FT /evidence="ECO:0000259|Pfam:PF13407"
SQ SEQUENCE 320 AA; 34481 MW; C84A215EA637C304 CRC64;
MKVRKILSLG IAGILAIGML TGCSMEGPSK SDNKGASDKK DLTIGVSTIT LQHQFFIDID
EGIKEKAKEL GVKVIVNDPD QDVAKQTSAI EDFIQQNVDG MIVLGTDNSA IVPAVEGAFE
KMPVVTVDAV LNTENITSYV GTVSYDAGKK LGEYTKKYID EKLGGKSEIA IVTDLKSQIQ
MQRIDGFKDA LKGSANVKIL NSQPGYDREE SLNTVENLIQ SNPDVDIIYA TAENSVLGAK
AALESAKNKD VKIVGFDLTE EASSGITDGT ILAMIQQQPK EMGRLAVEAV VKAIKGEKVE
KNIPVPALLY DKENIKDFKN
//
