ID D7KCN8_ARALL Unreviewed; 420 AA.
AC D7KCN8;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 24-JAN-2024, entry version 48.
DE SubName: Full=Protein-protein interaction regulator family protein {ECO:0000313|EMBL:EFH69111.1};
GN ORFNames=ARALYDRAFT_471712 {ECO:0000313|EMBL:EFH69111.1};
OS Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694};
RN [1] {ECO:0000313|Proteomes:UP000008694}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694};
RX PubMed=21478890; DOI=10.1038/ng.807;
RA Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K.,
RA Spannagl M., Wang X., Yang L., Nasrallah M.E., Bergelson J.,
RA Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y.,
RA Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT "The Arabidopsis lyrata genome sequence and the basis of rapid genome size
RT change.";
RL Nat. Genet. 43:476-481(2011).
CC -!- SIMILARITY: Belongs to the pinin family.
CC {ECO:0000256|ARBA:ARBA00010386}.
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DR EMBL; GL348713; EFH69111.1; -; Genomic_DNA.
DR RefSeq; XP_002892852.1; XM_002892806.1.
DR AlphaFoldDB; D7KCN8; -.
DR STRING; 81972.D7KCN8; -.
DR EnsemblPlants; fgenesh2_kg.1__1666__AT1G15200.1; fgenesh2_kg.1__1666__AT1G15200.1; fgenesh2_kg.1__1666__AT1G15200.1.
DR GeneID; 9326156; -.
DR Gramene; fgenesh2_kg.1__1666__AT1G15200.1; fgenesh2_kg.1__1666__AT1G15200.1; fgenesh2_kg.1__1666__AT1G15200.1.
DR KEGG; aly:9326156; -.
DR eggNOG; KOG3756; Eukaryota.
DR HOGENOM; CLU_044657_0_0_1; -.
DR OrthoDB; 468275at2759; -.
DR Proteomes; UP000008694; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR GO; GO:0003729; F:mRNA binding; IEA:EnsemblPlants.
DR GO; GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
DR GO; GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
DR InterPro; IPR039853; Pinin.
DR InterPro; IPR006786; Pinin_SDK_MemA.
DR PANTHER; PTHR12707:SF0; PININ; 1.
DR PANTHER; PTHR12707; PINN; 1.
DR Pfam; PF04696; Pinin_SDK_memA; 1.
PE 3: Inferred from homology;
KW mRNA processing {ECO:0000256|ARBA:ARBA00022664};
KW mRNA splicing {ECO:0000256|ARBA:ARBA00023187};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000008694};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 160..288
FT /note="Pinin/SDK/MemA protein"
FT /evidence="ECO:0000259|Pfam:PF04696"
FT REGION 18..158
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 179..209
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 350..379
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 18..37
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 54..91
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 112..135
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 195..209
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 350..367
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 420 AA; 48483 MW; F4FBC158514CCF43 CRC64;
MGDTALEKTA EELRHEIDEL HRQQREITER LRDPRGLRRG GFSSVVPRNQ GRRGFPRPAE
RNDAEDEPPA KRRLSSAVVK VDGEDVSKDG ELPVDGNGTQ VLVGENGTSD QSDKKLSVHH
RGSWSQRDAE QRGTKKGFEA FALPEPSPRV LPKNEDPKLV NRNRRMLGNL LGTLEKFRKE
DKQRSGTDAY ARRTATLQRA EEKAREESER LRLQERENLT EKRRRDLTLR ARVAAKAEQK
KLELLFLQWS EHQKKLTNFI RTKAEPHIYY ALVKPLEEDT SEVEKQKEQT FLEWKAARRQ
EVSEYQKEIE EQCLGNVEKE LERWQNARKA RKSNNEGMNL QETMDKELET HRMEHGPKKR
KIPGGNEEEE DEVEDINGGE DEMIMDDLLE EGGDGNIKEE VATDTVKAEA VKEDIKPEVV
//
