ID D7KCR5_ARALL Unreviewed; 895 AA.
AC D7KCR5;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 27-MAR-2024, entry version 66.
DE SubName: Full=Transducin family protein {ECO:0000313|EMBL:EFH69127.1};
GN ORFNames=ARALYDRAFT_888937 {ECO:0000313|EMBL:EFH69127.1};
OS Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694};
RN [1] {ECO:0000313|Proteomes:UP000008694}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694};
RX PubMed=21478890; DOI=10.1038/ng.807;
RA Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K.,
RA Spannagl M., Wang X., Yang L., Nasrallah M.E., Bergelson J.,
RA Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y.,
RA Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT "The Arabidopsis lyrata genome sequence and the basis of rapid genome size
RT change.";
RL Nat. Genet. 43:476-481(2011).
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus
CC {ECO:0000256|ARBA:ARBA00004604}.
CC -!- SIMILARITY: Belongs to the WD repeat PWP2 family.
CC {ECO:0000256|ARBA:ARBA00010226}.
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DR EMBL; GL348713; EFH69127.1; -; Genomic_DNA.
DR RefSeq; XP_002892868.1; XM_002892822.1.
DR AlphaFoldDB; D7KCR5; -.
DR STRING; 81972.D7KCR5; -.
DR EnsemblPlants; scaffold_101731.1; scaffold_101731.1; scaffold_101731.1.
DR GeneID; 9326167; -.
DR Gramene; scaffold_101731.1; scaffold_101731.1; scaffold_101731.1.
DR KEGG; aly:9326167; -.
DR eggNOG; KOG0291; Eukaryota.
DR HOGENOM; CLU_010458_0_0_1; -.
DR OrthoDB; 23263at2759; -.
DR Proteomes; UP000008694; Unassembled WGS sequence.
DR GO; GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
DR GO; GO:0009553; P:embryo sac development; IEA:EnsemblPlants.
DR GO; GO:0010119; P:regulation of stomatal movement; IEA:EnsemblPlants.
DR GO; GO:0009744; P:response to sucrose; IEA:EnsemblPlants.
DR GO; GO:0006364; P:rRNA processing; IEA:EnsemblPlants.
DR CDD; cd00200; WD40; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 3.
DR InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR InterPro; IPR027145; PWP2.
DR InterPro; IPR011047; Quinoprotein_ADH-like_supfam.
DR InterPro; IPR007148; SSU_processome_Utp12.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR19858:SF0; PERIODIC TRYPTOPHAN PROTEIN 2 HOMOLOG-RELATED; 1.
DR PANTHER; PTHR19858; WD40 REPEAT PROTEIN; 1.
DR Pfam; PF04003; Utp12; 1.
DR Pfam; PF00400; WD40; 5.
DR PRINTS; PR00320; GPROTEINBRPT.
DR SMART; SM00320; WD40; 10.
DR SUPFAM; SSF50998; Quinoprotein alcohol dehydrogenase-like; 1.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 2.
DR PROSITE; PS50082; WD_REPEATS_2; 4.
DR PROSITE; PS50294; WD_REPEATS_REGION; 4.
PE 3: Inferred from homology;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000008694};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT REPEAT 380..421
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 422..463
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 508..541
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 550..591
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT DOMAIN 785..890
FT /note="Small-subunit processome Utp12"
FT /evidence="ECO:0000259|Pfam:PF04003"
FT REGION 679..710
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 895 AA; 99735 MW; 3119A34E3C669D45 CRC64;
MNYRFQNLLG APYRGGNALI TQNTQLISPV GNRVSVTDLN KNHTVTLSLD SSSNICRIAA
SPDGTFLLAV DEQNRGLFIN LPRRVVLHRI TFNDNVSALK FSPNGKFIAV GIGKLVQIWR
SPGFRRAVMP FELVRTFANS DDIVVSLEWS LDSDYLLVGS KDLAARLFCV RKLKGVLNKP
FLFLGHRDSV VGCFFGVDKM TNKVNRAFTI ARDGYIFSWG YTGKDVKMDE SEDGHSEPPS
PVTPERADEV MVENGGGVGT DLKKRKEYDG KDLESDDDEE YMHRGKWVLL RKDGFNQASA
KVTACDYHQG LDMVVVGFSN GVFGLYQMPD FICIHLLSIS REKLTTAVFN QRGNWLTFGC
AKLGQLLVWD WRSESYILKQ QGHYFDVNCV TYSPDSQFLA TGADDNKVKV WSVMSGSCFI
TFTEHTNAVT ALHFMADNHS LLSASLDGTV RAWDFKRYKN YKTYTTPTPR QFVSLTADPS
GDVVCAGTLD SFEIFVWSKK TGQIKDILSG HEAPVHGLMF SPLTQILASS SWDNTVRLWD
VFASKGTVET FQHNHDVLTV AFRPDGKQLA SSTLDGQIHF WDTIEGVLMY TLEGRRDIAG
GRVMTDRRSA ANSSSGKCFT TLCYSADGGY ILAAGTSRYI CMYDIADQVL LRRIQISHNL
SLDGVLDFLH SKKMTEAGPM DLIDDDNSDE EAGIDKQSRG NLGYDLPGSR PNRGRPIIRT
KSLSIAPTGR SFAAATTEGV LIYSIDDTFI FDPTELDIDV TPEAVEAAIK EAEVSRALAL
SMRLNEDSLI KKCIFAVAPA DIKAVAISVR QKYLERLMEA LVDLLENCPH LEFILHWCQE
ICKAHGSSIQ RNYRILLPAL RSLQKAITRA HQDLADMCSS NEYTLRYLCS VPNNH
//
