ID D7KV93_ARALL Unreviewed; 285 AA.
AC D7KV93;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 27-MAR-2024, entry version 56.
DE RecName: Full=RRM domain-containing protein {ECO:0000259|PROSITE:PS50102};
GN ORFNames=ARALYDRAFT_476993 {ECO:0000313|EMBL:EFH63990.1};
OS Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694};
RN [1] {ECO:0000313|Proteomes:UP000008694}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694};
RX PubMed=21478890; DOI=10.1038/ng.807;
RA Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K.,
RA Spannagl M., Wang X., Yang L., Nasrallah M.E., Bergelson J.,
RA Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y.,
RA Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT "The Arabidopsis lyrata genome sequence and the basis of rapid genome size
RT change.";
RL Nat. Genet. 43:476-481(2011).
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DR EMBL; GL348714; EFH63990.1; -; Genomic_DNA.
DR RefSeq; XP_002887731.1; XM_002887685.1.
DR AlphaFoldDB; D7KV93; -.
DR STRING; 81972.D7KV93; -.
DR EnsemblPlants; fgenesh2_kg.2__2123__AT1G78260.1; fgenesh2_kg.2__2123__AT1G78260.1; fgenesh2_kg.2__2123__AT1G78260.1.
DR GeneID; 9325245; -.
DR Gramene; fgenesh2_kg.2__2123__AT1G78260.1; fgenesh2_kg.2__2123__AT1G78260.1; fgenesh2_kg.2__2123__AT1G78260.1.
DR KEGG; aly:9325245; -.
DR eggNOG; KOG0149; Eukaryota.
DR HOGENOM; CLU_048669_0_2_1; -.
DR OrthoDB; 1217892at2759; -.
DR Proteomes; UP000008694; Unassembled WGS sequence.
DR GO; GO:0003729; F:mRNA binding; IEA:EnsemblPlants.
DR CDD; cd12384; RRM_RBM24_RBM38_like; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR PANTHER; PTHR11176; BOULE-RELATED; 1.
DR PANTHER; PTHR11176:SF23; RNA-BINDING (RRM_RBD_RNP MOTIFS) FAMILY PROTEIN; 1.
DR Pfam; PF00076; RRM_1; 1.
DR SMART; SM00360; RRM; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR PROSITE; PS50102; RRM; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000008694};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176}.
FT DOMAIN 17..94
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 90..127
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 247..271
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 105..120
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 285 AA; 31321 MW; 91249010623B0EAE CRC64;
MSQTSYYRSP FGDTTYTKVF VGGLAWETPT DEMRRYFDQF GEILEAVIIT DKNTGKSKGY
GFVTFREADS ATRAVADPNP VIDGRKANCN IASFGRPRPS PPRGRGQTGS PSQYQSGGPS
GYTGMAAPLP PAAAPQLMYP SYGYTYNPDQ FGYHQALYNT QLQQAQYYQQ QQQLYGGGAT
SPSSSGTIMP SPYYYGYSLQ APRVPYQHHH HHLPQPYNPQ QHHQRFSSPS FLVYPSNSSF
TPPLQGLLSS STDSEAVPQQ IPATEGEATT APEITTINTK EPISS
//
