ID D7LS92_ARALL Unreviewed; 409 AA.
AC D7LS92;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 27-MAR-2024, entry version 58.
DE SubName: Full=Pentatricopeptide repeat-containing protein {ECO:0000313|EMBL:EFH52869.1};
GN ORFNames=ARALYDRAFT_907669 {ECO:0000313|EMBL:EFH52869.1};
OS Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694};
RN [1] {ECO:0000313|Proteomes:UP000008694}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694};
RX PubMed=21478890; DOI=10.1038/ng.807;
RA Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K.,
RA Spannagl M., Wang X., Yang L., Nasrallah M.E., Bergelson J.,
RA Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y.,
RA Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT "The Arabidopsis lyrata genome sequence and the basis of rapid genome size
RT change.";
RL Nat. Genet. 43:476-481(2011).
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DR EMBL; GL348717; EFH52869.1; -; Genomic_DNA.
DR RefSeq; XP_002876610.1; XM_002876564.1.
DR AlphaFoldDB; D7LS92; -.
DR EnsemblPlants; scaffold_503373.1; scaffold_503373.1; scaffold_503373.1.
DR GeneID; 9312678; -.
DR Gramene; scaffold_503373.1; scaffold_503373.1; scaffold_503373.1.
DR KEGG; aly:9312678; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_036660_1_0_1; -.
DR OrthoDB; 680254at2759; -.
DR Proteomes; UP000008694; Unassembled WGS sequence.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 3.
DR PANTHER; PTHR47937; PLASTID TRANSCRIPTIONALLY ACTIVE CHROMOSOME 2-LIKE PROTEIN; 1.
DR PANTHER; PTHR47937:SF3; PPR_LONG DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF01535; PPR; 6.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 3.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000008694};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 123..158
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 321..351
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 368..402
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 409 AA; 46524 MW; 488898D92360C016 CRC64;
MSLLRRIVRN STVSKAVLVA KAFKPYPLGR DPSSLPKLDT VSIRDIDDRP ISLRYRVTAM
IEMSILDEAS KLSRLAVLDK FRVDGDTVFI CNSVIGAMCS AKRYDDAISL FNYFFNESQT
LPNVLSCNLI MKAHCDQGHV DDALELYRHI LLDGRLVPGI ETYMILTKAL VDAKRFDEAC
DLAGSMSSCS FMVYDILIRG FLDIGNFVKA SQIFKELEGL DRKFPWREYH KAFAIFNVSF
VNYFFKQGKD EEAMEILATL EDAQVLKPIV GNRVLKVLVE HGKKTEAWEL FEEMIKICDS
ETIDIMSEYF IENTVPFERL RTTCYRTMIA SLCKHGRVLE AEKYFAEMFT DAEIFTDVDG
EDLLVGPDLS TFRAMINGYV KVGAVNDAIK TLNKLRISNI RKLAIHRAP
//
