ID D7LUW5_ARALL Unreviewed; 1257 AA.
AC D7LUW5;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 27-MAR-2024, entry version 76.
DE RecName: Full=Structural maintenance of chromosomes protein {ECO:0000256|PIRNR:PIRNR005719};
GN ORFNames=ARALYDRAFT_323999 {ECO:0000313|EMBL:EFH52522.1};
OS Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694};
RN [1] {ECO:0000313|Proteomes:UP000008694}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694};
RX PubMed=21478890; DOI=10.1038/ng.807;
RA Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K.,
RA Spannagl M., Wang X., Yang L., Nasrallah M.E., Bergelson J.,
RA Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y.,
RA Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT "The Arabidopsis lyrata genome sequence and the basis of rapid genome size
RT change.";
RL Nat. Genet. 43:476-481(2011).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|PIRNR:PIRNR005719}.
CC -!- SIMILARITY: Belongs to the SMC family. SMC1 subfamily.
CC {ECO:0000256|ARBA:ARBA00005597}.
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DR EMBL; GL348717; EFH52522.1; -; Genomic_DNA.
DR RefSeq; XP_002876263.1; XM_002876217.1.
DR AlphaFoldDB; D7LUW5; -.
DR STRING; 81972.D7LUW5; -.
DR EnsemblPlants; fgenesh1_pm.C_scaffold_5001543; fgenesh1_pm.C_scaffold_5001543; fgenesh1_pm.C_scaffold_5001543.
DR Gramene; fgenesh1_pm.C_scaffold_5001543; fgenesh1_pm.C_scaffold_5001543; fgenesh1_pm.C_scaffold_5001543.
DR eggNOG; KOG0018; Eukaryota.
DR HOGENOM; CLU_001042_0_1_1; -.
DR Proteomes; UP000008694; Unassembled WGS sequence.
DR GO; GO:0008278; C:cohesin complex; IEA:InterPro.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0007059; P:chromosome segregation; IEA:EnsemblPlants.
DR GO; GO:0051321; P:meiotic cell cycle; IEA:UniProtKB-KW.
DR GO; GO:0007062; P:sister chromatid cohesion; IEA:EnsemblPlants.
DR CDD; cd03275; ABC_SMC1_euk; 1.
DR Gene3D; 1.20.1060.20; -; 1.
DR Gene3D; 3.30.70.1620; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR003395; RecF/RecN/SMC_N.
DR InterPro; IPR024704; SMC.
DR InterPro; IPR028468; Smc1_ABC.
DR InterPro; IPR010935; SMC_hinge.
DR InterPro; IPR036277; SMC_hinge_sf.
DR PANTHER; PTHR18937:SF12; STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN; 1.
DR PANTHER; PTHR18937; STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER; 1.
DR Pfam; PF06470; SMC_hinge; 1.
DR Pfam; PF02463; SMC_N; 1.
DR PIRSF; PIRSF005719; SMC; 1.
DR SMART; SM00968; SMC_hinge; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR SUPFAM; SSF75553; Smc hinge domain; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054, ECO:0000256|SAM:Coils};
KW Meiosis {ECO:0000256|ARBA:ARBA00023254};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PIRNR:PIRNR005719};
KW Reference proteome {ECO:0000313|Proteomes:UP000008694}.
FT DOMAIN 526..652
FT /note="SMC hinge"
FT /evidence="ECO:0000259|SMART:SM00968"
FT COILED 161..272
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 316..378
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 407..511
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 694..799
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 824..877
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 918..973
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 1257 AA; 145463 MW; 4BFE3E031E2B76E0 CRC64;
MPAIQTPSGK ILQLEMENFK SYKGHQLVGP FKDFTAIIGP NGAGKSNLMD AISFVLGVRT
GQLRGSQLKD LIYAFDDRDK EQRGRRAFVR LVYQMDDGVE LHFTRTITSA GGSEYRIDNR
VVNLDEYNGK LRSLGILVKA RNFLVFQGDV ESIASKNPKE LTGLLEEISG SEELKKEYEE
LEEKKASAEE KAALIYQKKK TIGNEKKLKK AQKEEAEKHL RLQEELKALK RERFLWQLYN
IENDIEKATE DVDAEKSNRK DVMRELEKFE REAGKRKVEQ AKYLKEIAQR EKKIAEKSSK
LGKIVSIPWK SVQPELLRFK EEIARIKAKI ESNRKDVDKR KKEKGKHSKE IEQMQDSIKE
LNKKMELYNE KRQDSSGKLP MLDSQLQDYF RLKEEAGMKT IKLRDEHEVL ERQRRTDLEA
LRNLEENYQQ LINRKNDLDE QIKRFKDRQE EIETSSSKYK NETTSLKKEL RALQEKHVNA
RNASEKLKTR IAELEDQLSD LTAERYENER DSRLTQAVES LKRLFQGVHG RMTDLCRPNR
KKYNLAVTVA MGRFMDAVVV EDENTGKDCI KYLKEQRLPP MTFIPLQSVR VKQVSERLRN
LGGTAKLVFD VSKVYVLVLN YSTFDPELEK AVLFAVGNTL VCDELEEAKV LSWTGERHKV
VTVDGILLTK AGTMTGGTSG GMEAKSNKWD DKKIEGLKKK KEEHELELEN IGSIREMQMK
ESEISGKISG LEKKIQYAEI EKKSIKDKLP QLEQEKRNII EEIDRIKPEL SKAIAKTEVD
KRKTEMNKLE KRMNEIVDRI YKDFSQSVGV PNIRVYEETQ LKTAEKEAEE RLELSNQLAK
LKYQLEYEQN RDVGSRIRKL ESSISSLETD LEGIQKTMSE RKETAVKITN EINNWKKEME
AKICTGIFFL KDYLMLLLAE CKKKSEEYEK EILDWKKQAS QATTSITKLN RQIHSKETQI
EQLISQKQEI TEKCELEHIT LPVLSDAMEE DDSDGPQFDF SELDRAYLQE RRPSAREKVE
AEFRQKIESK TSEIERTAPN LRALDQYEAI QEKEKQVSQE FEAARKEEKQ VADAFNTVKQ
KRYELFMEAF NHIASNIDKI YKQLTKSNTH PLGGTAYLNL ENEDDPFLHG IKYTTMPPTK
RFRDMEQLSG GEKTVAALAL LFSIHSYRPS PFFILDEVDA ALDNLNVAKV AKFIRSKSCQ
AARDNQDTED GNGFQSIVIS LKDSFYDKAE ALVGVYRDTE RSCSSTMSFD LRNYQES
//
