ID   D7LW55_ARALL            Unreviewed;       741 AA.
AC   D7LW55;
DT   10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT   10-AUG-2010, sequence version 1.
DT   27-MAR-2024, entry version 50.
DE   SubName: Full=Pentatricopeptide repeat-containing protein {ECO:0000313|EMBL:EFH52728.1};
GN   ORFNames=ARALYDRAFT_486310 {ECO:0000313|EMBL:EFH52728.1};
OS   Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694};
RN   [1] {ECO:0000313|Proteomes:UP000008694}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694};
RX   PubMed=21478890; DOI=10.1038/ng.807;
RA   Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA   Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA   Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K.,
RA   Spannagl M., Wang X., Yang L., Nasrallah M.E., Bergelson J.,
RA   Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y.,
RA   Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT   "The Arabidopsis lyrata genome sequence and the basis of rapid genome size
RT   change.";
RL   Nat. Genet. 43:476-481(2011).
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DR   EMBL; GL348717; EFH52728.1; -; Genomic_DNA.
DR   RefSeq; XP_002876469.1; XM_002876423.1.
DR   AlphaFoldDB; D7LW55; -.
DR   STRING; 81972.D7LW55; -.
DR   EnsemblPlants; fgenesh2_kg.5__2302__AT3G58590.1; fgenesh2_kg.5__2302__AT3G58590.1; fgenesh2_kg.5__2302__AT3G58590.1.
DR   GeneID; 9314297; -.
DR   Gramene; fgenesh2_kg.5__2302__AT3G58590.1; fgenesh2_kg.5__2302__AT3G58590.1; fgenesh2_kg.5__2302__AT3G58590.1.
DR   KEGG; aly:9314297; -.
DR   eggNOG; KOG4197; Eukaryota.
DR   HOGENOM; CLU_002706_15_6_1; -.
DR   OrthoDB; 1218554at2759; -.
DR   Proteomes; UP000008694; Unassembled WGS sequence.
DR   GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR   GO; GO:0009451; P:RNA modification; IEA:InterPro.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 6.
DR   InterPro; IPR002885; Pentatricopeptide_rpt.
DR   InterPro; IPR045215; PPR_prot_At1g15510.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   NCBIfam; TIGR00756; PPR; 5.
DR   PANTHER; PTHR24015:SF1672; OS06G0506100 PROTEIN; 1.
DR   PANTHER; PTHR24015; OS07G0578800 PROTEIN-RELATED; 1.
DR   Pfam; PF01535; PPR; 5.
DR   Pfam; PF13041; PPR_2; 3.
DR   Pfam; PF13812; PPR_3; 1.
DR   PROSITE; PS51375; PPR; 5.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000008694};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT   REPEAT          79..113
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          280..314
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          509..543
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          580..614
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          646..680
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ   SEQUENCE   741 AA;  82684 MW;  06DA8646FE269C42 CRC64;
     MSLSCGDLAN QNGRLVSLLN VCRKAPSFAR TKALHALSIT LCSVILQPVY ISNNIICLYE
     KLGEVSLAGK VFDQMPERNK VSFNTIINGY SKYGDAEKAW GVLSEMRYFG YLPNQSTVSG
     LLSCASLDIR AGTQLHGLSL KYGLFMADAY VGTCLLCFYG RLELLEMAEQ VFEDMPFKSL
     ETWNHMMSLL GHHGFLKECM FLFRELVGMG ACLTESSLLG VLKGVSCEND LEISKQLHCS
     ATKQGLDCEI SVVNSLISAY GKCGNTHMAE RMFQEAGSWD IVSWNAIIGA TAKSENPLKT
     LKLFVSMPEH GFSPNQGTYI SVLGASSLRQ LLSFGRQIHG MLIKNGCKTD IFLGNALIDF
     YAKCGSLEDS HLCFDYIRDK NIVCWNALLS GYSNKDGPIC LSLFLQMLQM GFRPTEYTFS
     TTLKSCCVTE LQQLHSVIVR MGYEDNDYVL SSLMRSYAKN QLMSDALFLL DWASGPTSVV
     PLNIVAGIYS RRGQYHESVK LISTLEQPDT VSWNIAIAAC SRSDNHGEVI DLFKHMLQSN
     IRPDNYTFVS ILSLCSKLCD LTLGSSIHGL ITKTDFSCVD TFVCNVLIDM YGKCGSIRSV
     IKVFEETREK NLITWTALIS SLGIYGYGHE ALEKFKETLS LGFKPDRVSF ISILTACRHG
     GMVKEGMDLF QKMKDYGIEP EMDHYRCAVD LLARNGYLKE AEHLIHRMPF PADAPVWRTF
     LDGCNRFAEE QRNTLNVVSF Q
//