ID D7M9E6_ARALL Unreviewed; 535 AA.
AC D7M9E6;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 27-MAR-2024, entry version 55.
DE SubName: Full=Pentatricopeptide repeat-containing protein {ECO:0000313|EMBL:EFH44231.1};
GN ORFNames=ARALYDRAFT_914793 {ECO:0000313|EMBL:EFH44231.1};
OS Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694};
RN [1] {ECO:0000313|Proteomes:UP000008694}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694};
RX PubMed=21478890; DOI=10.1038/ng.807;
RA Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K.,
RA Spannagl M., Wang X., Yang L., Nasrallah M.E., Bergelson J.,
RA Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y.,
RA Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT "The Arabidopsis lyrata genome sequence and the basis of rapid genome size
RT change.";
RL Nat. Genet. 43:476-481(2011).
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DR EMBL; GL348719; EFH44231.1; -; Genomic_DNA.
DR RefSeq; XP_002867972.1; XM_002867926.1.
DR AlphaFoldDB; D7M9E6; -.
DR EnsemblPlants; scaffold_702535.1; scaffold_702535.1; scaffold_702535.1.
DR GeneID; 9306093; -.
DR Gramene; scaffold_702535.1; scaffold_702535.1; scaffold_702535.1.
DR KEGG; aly:9306093; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_0_6_1; -.
DR OrthoDB; 1218917at2759; -.
DR Proteomes; UP000008694; Unassembled WGS sequence.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 5.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 6.
DR PANTHER; PTHR47924:SF204; DYW_DEAMINASE DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR47924; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 6.
DR Pfam; PF13041; PPR_2; 2.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 4.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000008694};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 74..108
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 175..209
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 237..271
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 339..373
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 535 AA; 59438 MW; 1FDA1FF2FBCC16B9 CRC64;
MSACSSTTPV PILSFTERAK SLLEIQQAHA FMLKTGLFHD TFSASKLVAF AATNPEPKTV
SYAHSILNRI ESPNGFTHNS VIRAYANSST PEIALTVFRE MLLGPVFPDK YSFTFVLKAC
AAFCGFEEGR QIHGLFMKSD LVTDVFVENT LINVYGRSGY FEIARKVLDR MPVRDAVSWN
SLLSAYLDKG LVEEARALFD EMEERNVESW NFMISGYAAA GLVKEAREVF DSMPVKDVVS
WNAMVTAYAH VGCYNEVLEV FNMMLDDSAE RPDGFTLVNV LSACASLGSL SQGEWVHVYI
DKHGIEIEGF VATALVDMYS KCGKIDKALE VFRDTSKRDV STWNSIITGL SVHGLGKDAL
EIFSEMVYEG FKPNGITFIG VLSACNHVGL LDQARKLFEM MNSVYGIEPT IEHYGCMVDL
LGRMGKFEEA EELVNEVPAD EASILLESLL GACKRFGKLE QAERIANRLL ESNPRESSGY
VQMSNLYASH GRWDEAMEVR GKMRAERVKK NPGCSMIEVD GVVHEFLAGE GLRIE
//
