ID D7MF72_ARALL Unreviewed; 455 AA.
AC D7MF72;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 27-MAR-2024, entry version 58.
DE SubName: Full=RNA recognition motif-containing protein {ECO:0000313|EMBL:EFH45859.1};
GN ORFNames=ARALYDRAFT_492141 {ECO:0000313|EMBL:EFH45859.1};
OS Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694};
RN [1] {ECO:0000313|Proteomes:UP000008694}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694};
RX PubMed=21478890; DOI=10.1038/ng.807;
RA Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K.,
RA Spannagl M., Wang X., Yang L., Nasrallah M.E., Bergelson J.,
RA Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y.,
RA Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT "The Arabidopsis lyrata genome sequence and the basis of rapid genome size
RT change.";
RL Nat. Genet. 43:476-481(2011).
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DR EMBL; GL348719; EFH45859.1; -; Genomic_DNA.
DR RefSeq; XP_002869600.1; XM_002869554.1.
DR AlphaFoldDB; D7MF72; -.
DR STRING; 81972.D7MF72; -.
DR EnsemblPlants; fgenesh2_kg.7__1574__AT4G26650.1; fgenesh2_kg.7__1574__AT4G26650.1; fgenesh2_kg.7__1574__AT4G26650.1.
DR Gramene; fgenesh2_kg.7__1574__AT4G26650.1; fgenesh2_kg.7__1574__AT4G26650.1; fgenesh2_kg.7__1574__AT4G26650.1.
DR eggNOG; KOG4205; Eukaryota.
DR HOGENOM; CLU_012062_1_2_1; -.
DR OrthoDB; 5491699at2759; -.
DR Proteomes; UP000008694; Unassembled WGS sequence.
DR GO; GO:0003729; F:mRNA binding; IEA:EnsemblPlants.
DR CDD; cd12325; RRM1_hnRNPA_hnRNPD_like; 1.
DR CDD; cd12330; RRM2_Hrp1p; 1.
DR Gene3D; 3.30.70.330; -; 2.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR PANTHER; PTHR48032; RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6; 1.
DR PANTHER; PTHR48032:SF7; RRM DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF00076; RRM_1; 2.
DR SMART; SM00360; RRM; 2.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 2.
DR PROSITE; PS50102; RRM; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000008694};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176}.
FT DOMAIN 15..91
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 122..199
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 426..455
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 428..448
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 455 AA; 49581 MW; 21977C083268D8FA CRC64;
MNLEEQKMES ASDLGKLFIG GISWDTDEER LQEYFGKYGD LVEAVIMRDR TTGRARGFGF
IVFADPSVAE RVIMDKHIID GRTVEAKKAV PRDDQQVLKR HASPMHLISP SHGGNGGGAR
TKKIFVGGLP SSITEAEFKN YFDQFGTIAD VVVMYDHNTQ RPRGFGFITF DSEESVDMVL
HKTFHELNGK MVEVKRAVPK ELSSTTPNRS PLIGYANNYG VVPNRSSANS YFNSFPPGYN
NNNLGSAGRF SPIGSGRNAF SSFGLGLNQE LNLNSSFDGN TLGYSRIPGN QYFNSASPNR
YNSPIGYNRG DSAYNPSNRD LWGNRSDSSG PGWNLGVSVG NNRGNWGLSS VVSDTNGFGR
TYGAGSGLSG LSFSGNTNGF DGSIGELYRG SSVYSDSTWQ QSMPHHQSSN ELDGLSRSYG
FGIDNVGSDP SANASEGYPQ NYNVRNRQTH RGIEA
//
