ID D7MT62_ARALL Unreviewed; 530 AA.
AC D7MT62;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 27-MAR-2024, entry version 59.
DE RecName: Full=Zinc finger family protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=ARALYDRAFT_358227 {ECO:0000313|EMBL:EFH40925.1};
OS Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694};
RN [1] {ECO:0000313|Proteomes:UP000008694}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694};
RX PubMed=21478890; DOI=10.1038/ng.807;
RA Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K.,
RA Spannagl M., Wang X., Yang L., Nasrallah M.E., Bergelson J.,
RA Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y.,
RA Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT "The Arabidopsis lyrata genome sequence and the basis of rapid genome size
RT change.";
RL Nat. Genet. 43:476-481(2011).
CC -!- COFACTOR:
CC Name=Zn(2+); Xref=ChEBI:CHEBI:29105;
CC Evidence={ECO:0000256|ARBA:ARBA00001947};
CC -!- PATHWAY: Protein modification; protein ubiquitination.
CC {ECO:0000256|ARBA:ARBA00004906}.
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DR EMBL; GL348720; EFH40925.1; -; Genomic_DNA.
DR RefSeq; XP_002864666.1; XM_002864620.1.
DR AlphaFoldDB; D7MT62; -.
DR EnsemblPlants; fgenesh1_pg.C_scaffold_8002014; fgenesh1_pg.C_scaffold_8002014; fgenesh1_pg.C_scaffold_8002014.
DR Gramene; fgenesh1_pg.C_scaffold_8002014; fgenesh1_pg.C_scaffold_8002014; fgenesh1_pg.C_scaffold_8002014.
DR eggNOG; KOG1812; Eukaryota.
DR eggNOG; KOG3399; Eukaryota.
DR HOGENOM; CLU_514235_0_0_1; -.
DR UniPathway; UPA00143; -.
DR Proteomes; UP000008694; Unassembled WGS sequence.
DR GO; GO:0004842; F:ubiquitin-protein transferase activity; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0016567; P:protein ubiquitination; IEA:UniProtKB-UniPathway.
DR CDD; cd22582; BRcat_RBR_unk; 1.
DR CDD; cd22584; Rcat_RBR_unk; 1.
DR Gene3D; 1.20.120.1750; -; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR031127; E3_UB_ligase_RBR.
DR InterPro; IPR002867; IBR_dom.
DR InterPro; IPR044066; TRIAD_supradom.
DR InterPro; IPR034751; Yippee.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR11685; RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING; 1.
DR PANTHER; PTHR11685:SF457; TRANSLATION TERMINATION INHIBITOR PROTEIN ITT1; 1.
DR Pfam; PF01485; IBR; 1.
DR SMART; SM00647; IBR; 1.
DR SUPFAM; SSF57850; RING/U-box; 3.
DR PROSITE; PS51873; TRIAD; 1.
DR PROSITE; PS51792; YIPPEE; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000008694};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transferase {ECO:0000256|ARBA:ARBA00022679};
KW Ubl conjugation pathway {ECO:0000256|ARBA:ARBA00022786};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771}.
FT DOMAIN 162..370
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS51873"
FT DOMAIN 414..517
FT /note="Yippee"
FT /evidence="ECO:0000259|PROSITE:PS51792"
SQ SEQUENCE 530 AA; 61351 MW; F2EFD9A12A299E4D CRC64;
MATCEMDLDG VSLIDSAERK VKEKPQFHKL YFNSLVSVEI VSKSETPVTT TRFDVVIRDH
KDNLVFKSNG LLHDHYMTST EAELSEISDY KEKKIALLMD DVKVMRKRFI SSNPVKMFNE
DVKFFYRPSM MKRCTKKKNR LTMSMLYQAK EAKKENQGKE PKKETCGICM EDIDPSLMFS
ACVYGHRYCL TCVKSHIEVK LLDGMKPNCP QPLCKCQLSM ARCGEILNEK LSLMWKQRIR
EDSIAYSQRV YCPYQRCSYL MSKTELSSSS AKYGRRRCFK CGGDFCIHCK VPWHSKLTCT
KYKRLHTQND VLKSLANLRE WRQCSNCQHM IERSSGCDHM TCRCGNSFNY TRGANGISLA
GHRAFITRYN NQFGYSLTGH REFSSRYENR FQSEKHDERF GEMGRLFKID LEGSVYKCKH
CEVEFVVYGD PPITRNLLLQ YPPSLGKLYC ITKCYNVVID ADIMEFTVNG RVDKSMRPVF
CIGCGSHVGM YYEGADDTVM YNEGNFFINR FKLHGPPEGS DDENPSNQEE
//
