ID D7MW03_ARALL Unreviewed; 309 AA.
AC D7MW03;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 27-MAR-2024, entry version 46.
DE RecName: Full=Pentatricopeptide repeat-containing protein {ECO:0008006|Google:ProtNLM};
DE Flags: Fragment;
GN ORFNames=ARALYDRAFT_497209 {ECO:0000313|EMBL:EFH39273.1};
OS Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694};
RN [1] {ECO:0000313|Proteomes:UP000008694}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694};
RX PubMed=21478890; DOI=10.1038/ng.807;
RA Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K.,
RA Spannagl M., Wang X., Yang L., Nasrallah M.E., Bergelson J.,
RA Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y.,
RA Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT "The Arabidopsis lyrata genome sequence and the basis of rapid genome size
RT change.";
RL Nat. Genet. 43:476-481(2011).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR EMBL; GL348756; EFH39273.1; -; Genomic_DNA.
DR RefSeq; XP_002863014.1; XM_002862968.1.
DR AlphaFoldDB; D7MW03; -.
DR STRING; 81972.D7MW03; -.
DR EnsemblPlants; fgenesh2_kg.53__1__AT2G36240.1; fgenesh2_kg.53__1__AT2G36240.1; fgenesh2_kg.53__1__AT2G36240.1.
DR Gramene; fgenesh2_kg.53__1__AT2G36240.1; fgenesh2_kg.53__1__AT2G36240.1; fgenesh2_kg.53__1__AT2G36240.1.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_901898_0_0_1; -.
DR Proteomes; UP000008694; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 2.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 2.
DR PANTHER; PTHR47941; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 3, MITOCHONDRIAL; 1.
DR PANTHER; PTHR47941:SF30; REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED; 1.
DR Pfam; PF01535; PPR; 1.
DR Pfam; PF13041; PPR_2; 1.
DR PROSITE; PS51375; PPR; 1.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000008694};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 37..57
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT REPEAT 123..157
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:EFH39273.1"
SQ SEQUENCE 309 AA; 35370 MW; E4B9838CC5EADC5B CRC64;
QSPKHSNFLE NNLPHHQTLT PQTLLGFLRS KLRHQPLYAH YVLAVFNWAA TLMITILSSG
CRDHSPPGTG LTIFIFFSPC PCSSGIFSCP QLEPIFRSAI DAYYMDKALR FYQRMGKERA
KPDVCTFNTL INGYCRSFKF DLALDLFREM KEQGCEPNLG EGQVDDARGL VIVYRVSLKN
KADREMEMVE ELWKKGQTPC FIACTTLVQG LRKSERVEKA SGFMEKMMNA GILRDTTKDL
KPMRQHTMFL VSGFTKEGRR KEREVIVNEM WDKDVLPDIF TYNRLMDSLS CIGKFCIEAS
PDVCLICVN
//
