ID D7PQK8_9GENT Unreviewed; 476 AA.
AC D7PQK8;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 27-MAR-2024, entry version 40.
DE SubName: Full=Phytochrome A {ECO:0000313|EMBL:ADI45747.1};
DE Flags: Fragment;
GN Name=phya {ECO:0000313|EMBL:ADI45747.1};
OS Finlaysonia insularum.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Gentianales; Apocynaceae; Periplocoideae; Finlaysonia.
OX NCBI_TaxID=413284 {ECO:0000313|EMBL:ADI45747.1};
RN [1] {ECO:0000313|EMBL:ADI45747.1}
RP NUCLEOTIDE SEQUENCE.
RA Livshultz T.;
RT "The phylogenetic position of milkweeds (Apocynaceae subfamilies
RT Secamonoideae and Asclepiadoideae): Evidence from the nucleus and
RT chloroplast.";
RL Taxon 59:0-0(2010).
CC -!- SIMILARITY: Belongs to the phytochrome family.
CC {ECO:0000256|ARBA:ARBA00008235}.
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DR EMBL; GU901341; ADI45747.1; -; Genomic_DNA.
DR GO; GO:0009881; F:photoreceptor activity; IEA:UniProtKB-KW.
DR GO; GO:0009584; P:detection of visible light; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR GO; GO:0007165; P:signal transduction; IEA:UniProt.
DR CDD; cd00130; PAS; 1.
DR Gene3D; 3.30.450.270; -; 1.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 3.30.450.20; PAS domain; 2.
DR InterPro; IPR003018; GAF.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013767; PAS_fold.
DR InterPro; IPR016132; Phyto_chromo_attachment.
DR InterPro; IPR013516; Phyto_chromo_BS.
DR InterPro; IPR001294; Phytochrome.
DR InterPro; IPR013515; Phytochrome_cen-reg.
DR InterPro; IPR043150; Phytochrome_PHY_sf.
DR PANTHER; PTHR47876; OS08G0260000 PROTEIN; 1.
DR PANTHER; PTHR47876:SF3; PHYTOCHROME 1; 1.
DR Pfam; PF01590; GAF; 1.
DR Pfam; PF00989; PAS; 1.
DR Pfam; PF00360; PHY; 1.
DR PRINTS; PR01033; PHYTOCHROME.
DR SMART; SM00065; GAF; 1.
DR SUPFAM; SSF55781; GAF domain-like; 2.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR PROSITE; PS50112; PAS; 1.
DR PROSITE; PS00245; PHYTOCHROME_1; 1.
DR PROSITE; PS50046; PHYTOCHROME_2; 1.
PE 3: Inferred from homology;
KW Chromophore {ECO:0000256|ARBA:ARBA00022991};
KW Photoreceptor protein {ECO:0000256|ARBA:ARBA00022543};
KW Receptor {ECO:0000256|ARBA:ARBA00023170};
KW Sensory transduction {ECO:0000256|ARBA:ARBA00022606};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 20..193
FT /note="Phytochrome chromophore attachment site"
FT /evidence="ECO:0000259|PROSITE:PS50046"
FT DOMAIN 419..476
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:ADI45747.1"
FT NON_TER 476
FT /evidence="ECO:0000313|EMBL:ADI45747.1"
SQ SEQUENCE 476 AA; 53449 MW; 130E97170C646485 CRC64;
QSYXXAAKAI TRLQSLPSGS TERLCDTMVQ EVFELTGYDR VMTYKFHEDD HGEVISEITK
PGLEPYLGLH YPATDIPQAA RFLFMKNKVR MICDCRAKHV KVLQDEKLSF DLTLCGSTLR
APHSCHLQYM ENMNSIASLV MAVVINDGDD EGDSSDSAQP QKRKRLWGLV VCHNATPRFV
PFPLRYACEF LAQVFAIHVN KELELENQIV EKNILKTQTL LCDMLMRDAP LGIVSQNPNI
MDLVKCDGAA LLYKNKIHLM GKSPSDSQLN DIVSWLIEYH MDSTGLSTDS LYDAGFPGAL
ALGDAVCGMA AVRISDRDWL FWFRSHXAAD IRWGGAKHEL GEKDDGRKMH PRSSFKAFLE
VVKTRSLPWK DYEMDAIHSL QLILRNSFKE VEAPEFETKT IHTKLNDLRI DGFQELEAVT
AEMVRLIETA SVPILAVDVD GLVNGWNTKI AELTGLPVDE AIGKHLLTLV EDSSTQ
//
