ID D8EZB1_9DELT Unreviewed; 493 AA.
AC D8EZB1;
DT 05-OCT-2010, integrated into UniProtKB/TrEMBL.
DT 05-OCT-2010, sequence version 1.
DT 24-JAN-2024, entry version 37.
DE SubName: Full=Integrase core domain protein {ECO:0000313|EMBL:EFK11146.1};
GN ORFNames=NPH_2026 {ECO:0000313|EMBL:EFK06759.1}, NPH_2842
GN {ECO:0000313|EMBL:EFK05279.1}, NPH_7379 {ECO:0000313|EMBL:EFK11146.1};
OS delta proteobacterium NaphS2.
OC Bacteria; Deltaproteobacteria.
OX NCBI_TaxID=88274 {ECO:0000313|EMBL:EFK11146.1, ECO:0000313|Proteomes:UP000003834};
RN [1] {ECO:0000313|EMBL:EFK11146.1, ECO:0000313|Proteomes:UP000003834}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NaphS2 {ECO:0000313|EMBL:EFK11146.1,
RC ECO:0000313|Proteomes:UP000003834};
RX PubMed=21124915; DOI=10.1371/journal.pone.0014072;
RA Didonato R.J., Young N.D., Butler J.E., Chin K.J., Hixson K.K., Mouser P.,
RA Lipton M.S., Deboy R., Methe B.A.;
RT "Genome Sequence of the Deltaproteobacterial Strain NaphS2 and Analysis of
RT Differential Gene Expression during Anaerobic Growth on Naphthalene.";
RL PLoS ONE 5:E14072-E14072(2010).
RN [2] {ECO:0000313|EMBL:EFK11146.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=NaphS2 {ECO:0000313|EMBL:EFK11146.1};
RA DeBoy R., Durkin A.S., Methe B., Young N.;
RL Submitted (JUN-2010) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the transposase IS21/IS408/IS1162 family.
CC {ECO:0000256|ARBA:ARBA00009277}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EFK11146.1}.
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DR EMBL; ADZZ01000800; EFK05279.1; -; Genomic_DNA.
DR EMBL; ADZZ01000606; EFK06759.1; -; Genomic_DNA.
DR EMBL; ADZZ01000137; EFK11146.1; -; Genomic_DNA.
DR AlphaFoldDB; D8EZB1; -.
DR OrthoDB; 9798623at2; -.
DR Proteomes; UP000003834; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR017894; HTH_IS21_transposase_type.
DR InterPro; IPR001584; Integrase_cat-core.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR NCBIfam; NF033546; transpos_IS21; 1.
DR PANTHER; PTHR35004; TRANSPOSASE RV3428C-RELATED; 1.
DR PANTHER; PTHR35004:SF6; TRANSPOSASE RV3428C-RELATED; 1.
DR Pfam; PF00665; rve; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50531; HTH_IS21; 1.
DR PROSITE; PS50994; INTEGRASE; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000003834}.
FT DOMAIN 5..66
FT /note="HTH IS21-type"
FT /evidence="ECO:0000259|PROSITE:PS50531"
FT DOMAIN 110..285
FT /note="Integrase catalytic"
FT /evidence="ECO:0000259|PROSITE:PS50994"
SQ SEQUENCE 493 AA; 57237 MW; 2E15E6E9C79B92AF CRC64;
MIDYETFCQI KELKRNNLNA EQIARELSLN SRTVRKWVSE ERYMPRKSGW RPSKLDPFKK
DIIRDLEAYP YSAAQILARI REKGFEGGYS IVKKYVRKVR PPKVSPYLTL SFAPGECAQV
DWGSYGSVPV GSTKRRLSFF VMVMCYSRMA YVEFTVSQTM EHFLSCHQNA FHFFGTCPKK
IMVDNLKSAV LRRIVGQDPT FNPKYLDFAN HYGFTITPCN VGKGNEKGRV ENAVGYVKKN
FLAGLRIPDF QALGPAAGYW LDNIANVRIH GVTRKRPIDL FEEEKSLLNP LPHNPFDVGA
ISQVRASSQF RITLDTNKYS VPAEYAGLRL LLKAYPDRLC IYFQDKLIAR HERSYDRHQD
FEDPDHVKPL LVQRKKARDQ KLFMRFMALS KRAQQYYRKM EQRRMNPMHH VRKIVALSEI
YSTESVARAM EDAFHFQAFS SEYIANILEQ RSRVLPEPGA LHLTRREDLL ELKVDQPNLN
VYQNNGKEPH GQI
//
