ID D8IVV5_HERSS Unreviewed; 344 AA.
AC D8IVV5;
DT 05-OCT-2010, integrated into UniProtKB/TrEMBL.
DT 05-OCT-2010, sequence version 1.
DT 27-MAR-2024, entry version 55.
DE SubName: Full=ABC-type sugar transport system, periplasmic component protein {ECO:0000313|EMBL:ADJ65913.1};
GN OrderedLocusNames=Hsero_4447 {ECO:0000313|EMBL:ADJ65913.1};
OS Herbaspirillum seropedicae (strain SmR1).
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Oxalobacteraceae; Herbaspirillum.
OX NCBI_TaxID=757424 {ECO:0000313|EMBL:ADJ65913.1, ECO:0000313|Proteomes:UP000000329};
RN [1] {ECO:0000313|EMBL:ADJ65913.1, ECO:0000313|Proteomes:UP000000329}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SmR1 {ECO:0000313|EMBL:ADJ65913.1,
RC ECO:0000313|Proteomes:UP000000329};
RA Pedrosa F.O., Monteiro R.A., Wassem R., Cruz L.M., Ayub R.A., Colauto N.B.,
RA Fernandez M.A., Fungaro M.H.P., Grisard E.C., Hungria M., Madeira H.M.F.,
RA Nodari R.O., Osaku C.A., Petzl-Erler M.L., Terenzi H., Vieira L.G.E.,
RA Almeida M.I.M., Alves L.R., Arantes O.M.N., Balsanelli E., Barcellos F.G.,
RA Baura V.A., Binde D.R., Campo R.J., Chubatsu L.S., Chueire L.M.O.,
RA Ciferri R.R., Correa L.C., da Conceicao Silva J.L., Dabul A.N.G.,
RA Dambros B.P., Faoro H., Favetti A., Friedermann G., Furlaneto M.C.,
RA Gasques L.S., Gimenes C.C.T., Gioppo N.M.R., Glienke-Blanco C., Godoy L.P.,
RA Guerra M.P., Karp S., Kava-Cordeiro V., Margarido V.P., Mathioni S.M.,
RA Menck-Soares M.A., Murace N.K., Nicolas M.F., Oliveira C.E.C.,
RA Pagnan N.A.B., Pamphile J.A., Patussi E.V., Pereira L.F.P.,
RA Pereira-Ferrari L., Pinto F.G.S., Precoma C., Prioli A.J., Prioli S.M.A.P.,
RA Raittz R.T., Ramos H.J.O., Ribeiro E.M.S.F., Rigo L.U., Rocha C.L.M.S.C.,
RA Rocha S.N., Santos K., Satori D., Silva A.G., Simao R.C.G., Soares M.A.M.,
RA Souza E.M., Steffens M.B.R., Steindel M., Tadra-Sfeir M.Z., Takahashi E.K.,
RA Torres R.A., Valle J.S., Vernal J.I., Vilas-Boas L.A., Watanabe M.A.E.,
RA Weiss V.A., Yates M.A., Souza E.M.;
RT "The genome of Herbaspirillum seropedicae SmR1, an endophytic, nitrogen-
RT fixing, plant-growth promoting beta-Proteobacteria.";
RL Submitted (APR-2010) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Periplasm {ECO:0000256|ARBA:ARBA00004418}.
CC -!- SIMILARITY: Belongs to the bacterial solute-binding protein 2 family.
CC {ECO:0000256|ARBA:ARBA00007639}.
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DR EMBL; CP002039; ADJ65913.1; -; Genomic_DNA.
DR AlphaFoldDB; D8IVV5; -.
DR STRING; 757424.Hsero_4447; -.
DR KEGG; hse:Hsero_4447; -.
DR eggNOG; COG1879; Bacteria.
DR HOGENOM; CLU_037628_3_0_4; -.
DR OrthoDB; 9781890at2; -.
DR Proteomes; UP000000329; Chromosome.
DR GO; GO:0042597; C:periplasmic space; IEA:UniProtKB-SubCell.
DR GO; GO:0015762; P:rhamnose transmembrane transport; IEA:InterPro.
DR CDD; cd20000; PBP1_ABC_rhamnose; 1.
DR Gene3D; 3.40.50.2300; -; 2.
DR InterPro; IPR028082; Peripla_BP_I.
DR InterPro; IPR013459; RhaS.
DR InterPro; IPR025997; SBP_2_dom.
DR NCBIfam; TIGR02637; RhaS; 1.
DR PANTHER; PTHR30036; D-XYLOSE-BINDING PERIPLASMIC PROTEIN; 1.
DR PANTHER; PTHR30036:SF1; D-XYLOSE-BINDING PERIPLASMIC PROTEIN; 1.
DR Pfam; PF13407; Peripla_BP_4; 1.
DR SUPFAM; SSF53822; Periplasmic binding protein-like I; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000000329};
KW Signal {ECO:0000256|SAM:SignalP};
KW Sugar transport {ECO:0000313|EMBL:ADJ65913.1};
KW Transport {ECO:0000313|EMBL:ADJ65913.1}.
FT SIGNAL 1..35
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 36..344
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5003115651"
FT DOMAIN 41..299
FT /note="Periplasmic binding protein"
FT /evidence="ECO:0000259|Pfam:PF13407"
SQ SEQUENCE 344 AA; 35758 MW; 9CE6E05606E6F7F2 CRC64;
MTRNTFNAAA RPLRAALLAL AAGAIGLIAA APAHAAEKVR IAMVVKSLGN GFFDAAHEGA
KEAARELGDV EVIYTGPTTP TAEGQIEIVN SLISQKVDAI VISANDANAL VPITKRAMQR
GVKVLSFDSG IAKGGRLMQL NPSNAELIGL KQIQMAAEAI GGAGDVAILS ATAQATNQNI
WIGEMKKALA RPEFSRMKLV ATVYGDDQSD KSYREAIGLL RSHPGLKAII APTTVGINAA
GKAVVDEKLV GKVYVTGLGL PSEMAGHVKS GAVKSFAIWN PIDLGYAATY AAYQFVKGKA
QGKEGESIAV GRMGSIKLDA AGEAALAPPF TYDASNVDKF AKIF
//
