ID D8R3Z3_SELML Unreviewed; 1108 AA.
AC D8R3Z3;
DT 05-OCT-2010, integrated into UniProtKB/TrEMBL.
DT 05-OCT-2010, sequence version 1.
DT 27-MAR-2024, entry version 67.
DE RecName: Full=SNF2 family DNA-dependent ATPase {ECO:0008006|Google:ProtNLM};
DE Flags: Fragment;
GN ORFNames=SELMODRAFT_60241 {ECO:0000313|EMBL:EFJ33371.1};
OS Selaginella moellendorffii (Spikemoss).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Lycopodiopsida; Selaginellales; Selaginellaceae; Selaginella.
OX NCBI_TaxID=88036 {ECO:0000313|Proteomes:UP000001514};
RN [1] {ECO:0000313|EMBL:EFJ33371.1, ECO:0000313|Proteomes:UP000001514}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=21551031; DOI=10.1126/science.1203810;
RA Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M.,
RA dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., Ashton N.W.,
RA Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., Bonawitz N.D.,
RA Chapple C., Cheng C., Correa L.G., Dacre M., DeBarry J., Dreyer I.,
RA Elias M., Engstrom E.M., Estelle M., Feng L., Finet C., Floyd S.K.,
RA Frommer W.B., Fujita T., Gramzow L., Gutensohn M., Harholt J., Hattori M.,
RA Heyl A., Hirai T., Hiwatashi Y., Ishikawa M., Iwata M., Karol K.G.,
RA Koehler B., Kolukisaoglu U., Kubo M., Kurata T., Lalonde S., Li K., Li Y.,
RA Litt A., Lyons E., Manning G., Maruyama T., Michael T.P., Mikami K.,
RA Miyazaki S., Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R.,
RA Obara M., Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B.,
RA Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y.,
RA Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N.,
RA Shinohara N., Shippen D.E., Soerensen I., Sotooka R., Sugimoto N.,
RA Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., Wakazuki S.,
RA Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., Zimmer A.D., Zhu Q.,
RA Mitros T., Hellsten U., Loque D., Otillar R., Salamov A., Schmutz J.,
RA Shapiro H., Lindquist E., Lucas S., Rokhsar D., Grigoriev I.V.;
RT "The Selaginella genome identifies genetic changes associated with the
RT evolution of vascular plants.";
RL Science 332:960-963(2011).
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DR EMBL; GL377571; EFJ33371.1; -; Genomic_DNA.
DR RefSeq; XP_002965951.1; XM_002965905.1.
DR AlphaFoldDB; D8R3Z3; -.
DR STRING; 88036.D8R3Z3; -.
DR EnsemblPlants; EFJ33371; EFJ33371; SELMODRAFT_60241.
DR Gramene; EFJ33371; EFJ33371; SELMODRAFT_60241.
DR KEGG; smo:SELMODRAFT_60241; -.
DR eggNOG; KOG0386; Eukaryota.
DR HOGENOM; CLU_000942_1_0_1; -.
DR InParanoid; D8R3Z3; -.
DR Proteomes; UP000001514; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0008094; F:ATP-dependent activity, acting on DNA; IBA:GO_Central.
DR GO; GO:0140658; F:ATP-dependent chromatin remodeler activity; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IBA:GO_Central.
DR GO; GO:0045944; P:positive regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR CDD; cd04369; Bromodomain; 1.
DR CDD; cd18793; SF2_C_SNF; 1.
DR Gene3D; 1.20.920.10; Bromodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.40.50.10810; Tandem AAA-ATPase domain; 1.
DR InterPro; IPR001487; Bromodomain.
DR InterPro; IPR036427; Bromodomain-like_sf.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR038718; SNF2-like_sf.
DR InterPro; IPR049730; SNF2/RAD54-like_C.
DR InterPro; IPR000330; SNF2_N.
DR PANTHER; PTHR10799:SF978; ATP-DEPENDENT HELICASE BRM; 1.
DR PANTHER; PTHR10799; SNF2/RAD54 HELICASE FAMILY; 1.
DR Pfam; PF00439; Bromodomain; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF00176; SNF2-rel_dom; 1.
DR PRINTS; PR00503; BROMODOMAIN.
DR SMART; SM00297; BROMO; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF47370; Bromodomain; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS50014; BROMODOMAIN_2; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Bromodomain {ECO:0000256|ARBA:ARBA00023117, ECO:0000256|PROSITE-
KW ProRule:PRU00035}; Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000001514}.
FT DOMAIN 37..202
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 355..532
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT DOMAIN 923..993
FT /note="Bromo"
FT /evidence="ECO:0000259|PROSITE:PS50014"
FT REGION 644..741
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 774..813
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1045..1108
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 664..723
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 724..740
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 785..801
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1061..1100
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:EFJ33371.1"
FT NON_TER 1108
FT /evidence="ECO:0000313|EMBL:EFJ33371.1"
SQ SEQUENCE 1108 AA; 126637 MW; 886BD0C2CF8DDAA9 CRC64;
RYYTLAHAVN EQILRQPSML RAGILRDYQL VGLQWMLSLY NNRLNGILAD EMGLGKTVQV
MALIAYLMEF KGNYGPHLII VPNAVIVNWK SELLRWLPSV SSIFYVGVRE DRSRIYSQEV
AALKFNVLVT TYEFIMRDRS KLAKVDWKYI IIDEAQRMKD RESRLARDLD RFRCQRRLLL
TGTPLQNDLH ELWSLLNLLL PEVFDNSKAF HDWFSKPFQR DANTVEDDWL ETEKKVIVIH
RLHQILEPFM LRRRVEDVEG SLPPKVPVVL KCKMSSFQAA IYDWVKATGT IRLDPADEEE
RVASGNGKRQ ARAYAPLQNK CMELRKVCNH PYLNYPPHCR LFNENMVRMC GKLWILDRIL
IKLQRSGHRV LLFSTMTKLL DILEDYLQWR GLIYRRIDGT TPLDSRETAI VDFNAPGSQC
FIFLLSIRAA GRGLNLQTAD TVVIYDPDPN PKNEEQAVAR AHRIGQKSEV KVIYMEAVVE
SFTSYQMEDE LRNGGSLDVD DDMAGKDRYM GSVESLVRNN IQQHKIDMAD EVINAGRFDQ
RTTHEERRMT LEALLHDEER YQESVHDVPT LKEVNRMIAR SEEEVELFDQ MDEECDWPGE
MVAYDEVPEW LHVGSDEVNA AIKATSKQAL KALSRKNFTV IHDHKGLKPA RRGRPPFEVK
VPPTEIEDDE DLEEVVVEEE SSSGEDEEEG EIRDGSDEEE DDTGRQQQDD ADEMDDEAEA
VAESSDEREG SPEPRVELQV VDSKKFGSLA ALGSRSNQDL VSRDFDGEDL EEGEIAASGD
SPGDSPSEKD PDEDQIVEPR RKRKRSARHR RKVGVGAGNV PVQGVFPVGF LQTWPGYSEY
ERPDVWSITP RPATFIHTGF ANWSSQAASK QVRVNGFQEL AEEVAVAEMK ETRTVRGGAR
MQDNVQKKCK AVLSKLQGAM NKDGRQVSAL LMELPKRHEL PDYYKVIDKP IDAKTIEEHL
ERFDYATVLD FAGDVQLMLD NASRYNTHNA EVQADARRLH SLFFQRMGLM FPDVDFNSIK
INIGIRMSGS RSSRKQRQVF AEAGRLTPAA APPPQQEKED DGTGSVSRGK DSSSRKKTRP
GDRDRGQDQV THPADLVICK RKRNSRRK
//
