ID D8RTC6_SELML Unreviewed; 828 AA.
AC D8RTC6;
DT 05-OCT-2010, integrated into UniProtKB/TrEMBL.
DT 05-OCT-2010, sequence version 1.
DT 27-MAR-2024, entry version 61.
DE RecName: Full=Glycosyl hydrolase family 13 catalytic domain-containing protein {ECO:0000259|SMART:SM00642};
GN ORFNames=SELMODRAFT_414611 {ECO:0000313|EMBL:EFJ24484.1};
OS Selaginella moellendorffii (Spikemoss).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Lycopodiopsida; Selaginellales; Selaginellaceae; Selaginella.
OX NCBI_TaxID=88036 {ECO:0000313|Proteomes:UP000001514};
RN [1] {ECO:0000313|EMBL:EFJ24484.1, ECO:0000313|Proteomes:UP000001514}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=21551031; DOI=10.1126/science.1203810;
RA Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M.,
RA dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., Ashton N.W.,
RA Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., Bonawitz N.D.,
RA Chapple C., Cheng C., Correa L.G., Dacre M., DeBarry J., Dreyer I.,
RA Elias M., Engstrom E.M., Estelle M., Feng L., Finet C., Floyd S.K.,
RA Frommer W.B., Fujita T., Gramzow L., Gutensohn M., Harholt J., Hattori M.,
RA Heyl A., Hirai T., Hiwatashi Y., Ishikawa M., Iwata M., Karol K.G.,
RA Koehler B., Kolukisaoglu U., Kubo M., Kurata T., Lalonde S., Li K., Li Y.,
RA Litt A., Lyons E., Manning G., Maruyama T., Michael T.P., Mikami K.,
RA Miyazaki S., Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R.,
RA Obara M., Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B.,
RA Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y.,
RA Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N.,
RA Shinohara N., Shippen D.E., Soerensen I., Sotooka R., Sugimoto N.,
RA Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., Wakazuki S.,
RA Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., Zimmer A.D., Zhu Q.,
RA Mitros T., Hellsten U., Loque D., Otillar R., Salamov A., Schmutz J.,
RA Shapiro H., Lindquist E., Lucas S., Rokhsar D., Grigoriev I.V.;
RT "The Selaginella genome identifies genetic changes associated with the
RT evolution of vascular plants.";
RL Science 332:960-963(2011).
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast
CC {ECO:0000256|ARBA:ARBA00004229}.
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DR EMBL; GL377589; EFJ24484.1; -; Genomic_DNA.
DR RefSeq; XP_002974262.1; XM_002974216.1.
DR AlphaFoldDB; D8RTC6; -.
DR STRING; 88036.D8RTC6; -.
DR EnsemblPlants; EFJ24484; EFJ24484; SELMODRAFT_414611.
DR Gramene; EFJ24484; EFJ24484; SELMODRAFT_414611.
DR KEGG; smo:SELMODRAFT_414611; -.
DR eggNOG; KOG0470; Eukaryota.
DR HOGENOM; CLU_011725_2_0_1; -.
DR InParanoid; D8RTC6; -.
DR OMA; WHVSLAS; -.
DR Proteomes; UP000001514; Unassembled WGS sequence.
DR GO; GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
DR GO; GO:0019156; F:isoamylase activity; IEA:InterPro.
DR GO; GO:0019252; P:starch biosynthetic process; IEA:InterPro.
DR CDD; cd11346; AmyAc_plant_IsoA; 1.
DR CDD; cd02856; E_set_GDE_Isoamylase_N; 1.
DR Gene3D; 3.20.20.80; Glycosidases; 1.
DR Gene3D; 2.60.40.1180; Golgi alpha-mannosidase II; 1.
DR Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR InterPro; IPR044096; AmyAc_plant_ISA2.
DR InterPro; IPR044505; GlgX_Isoamylase_N_E_set.
DR InterPro; IPR006047; Glyco_hydro_13_cat_dom.
DR InterPro; IPR004193; Glyco_hydro_13_N.
DR InterPro; IPR013780; Glyco_hydro_b.
DR InterPro; IPR017853; Glycoside_hydrolase_SF.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR014756; Ig_E-set.
DR InterPro; IPR048650; ISOA1-3-like_C.
DR PANTHER; PTHR43002; GLYCOGEN DEBRANCHING ENZYME; 1.
DR PANTHER; PTHR43002:SF6; ISOAMYLASE 2, CHLOROPLASTIC; 1.
DR Pfam; PF00128; Alpha-amylase; 1.
DR Pfam; PF02922; CBM_48; 1.
DR Pfam; PF21156; ISOA1-3_C; 1.
DR SMART; SM00642; Aamy; 1.
DR SUPFAM; SSF51445; (Trans)glycosidases; 1.
DR SUPFAM; SSF81296; E set domains; 1.
DR SUPFAM; SSF51011; Glycosyl hydrolase domain; 1.
PE 4: Predicted;
KW Chloroplast {ECO:0000256|ARBA:ARBA00022528};
KW Plastid {ECO:0000256|ARBA:ARBA00022640};
KW Reference proteome {ECO:0000313|Proteomes:UP000001514};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT DOMAIN 355..700
FT /note="Glycosyl hydrolase family 13 catalytic"
FT /evidence="ECO:0000259|SMART:SM00642"
FT REGION 40..67
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 45..67
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 828 AA; 92283 MW; A6AE767415001A8B CRC64;
MALRGLGDSM AARLDLGNVL LPARSSRRWG RPTLDRKCRS GWSGRCRAQG QNSGVPTQEQ
DRKSQQDGAQ YMFHAESGGQ VRVSVQENSL KYMVNVEANL PDIFPGESPI LLHWGLFRSD
STDWVLLEPN DAPASTKFLG GKNEAMQTPM QQLASCVQTL QLELPLNMAP FYVSFVLCKP
ASKDSEDMWI KSNSGSNFCV PLGLRTGRPD PLGVTLEADG SANFALYSKN AANVTLCLYG
PEDIEPAMEI DLESVTHRTG DVWHVQLPSI EGFISYGYRC RGDETWENGN RFHKRRILLD
PYAKFVSPFI PGQEELPSPA TALGLLPTNV PTFDWEEESS PCIPLEQVVA YRLDVAGFTS
HSSCGLDERL RGTFLGLVEK ISHFQSLGVN TVIVRPIFSY DRSQGPYYPF SFFSPMEDYG
SGSSSLDASI SFKEMVKALH KNGIELILDV VYTHTSEKGD EDPETVSFRG IDNQTYYILD
KQKRILQSKF GAANVFNCNH PAVHKVVVDS LRYWVEEYHV DGFCFVNARD LTRGPHGEEL
SRPLLLEAIT FDPVLASTKL IADPYSPLSS VPEPLKFPHW KRWCECNINF QMDMTSFFRG
EQGKLSDLAT RICGRGLINY VTINSENACV SQKTSKTEPN VELQLHNLLV TQFLSRGTPV
LNMGDEYGLL DDGKAIQFDW QKLASATHTV NLISSLSLLR SQHESLLQKN KYVSSEMITW
HGATYEEEPL WTDPNSKFLA VTLEDNDTGD LCIAFNARDD VVELTLTEEA TWLRIIDTTL
PYPETIVLNG AELSSEAGTS NAGASYSVQP FSVVVLRAGK CQELKDQT
//
