ID E0VJQ8_PEDHC Unreviewed; 275 AA.
AC E0VJQ8;
DT 02-NOV-2010, integrated into UniProtKB/TrEMBL.
DT 02-NOV-2010, sequence version 1.
DT 24-JAN-2024, entry version 62.
DE SubName: Full=DNA-directed RNA polymerase II 33 kDa polypeptide, putative {ECO:0000313|EMBL:EEB13614.1, ECO:0000313|EnsemblMetazoa:PHUM249080-PA};
GN Name=8235037 {ECO:0000313|EnsemblMetazoa:PHUM249080-PA};
GN ORFNames=Phum_PHUM249080 {ECO:0000313|EMBL:EEB13614.1};
OS Pediculus humanus subsp. corporis (Body louse).
OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota;
OC Neoptera; Paraneoptera; Psocodea; Phthiraptera; Anoplura; Pediculidae;
OC Pediculus.
OX NCBI_TaxID=121224;
RN [1] {ECO:0000313|EMBL:EEB13614.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=USDA {ECO:0000313|EMBL:EEB13614.1};
RA Kirkness E., Hannick L., Hass B., Bruggner R., Lawson D., Bidwell S.,
RA Joardar V., Caler E., Walenz B., Inman J., Schobel S., Galinsky K.,
RA Amedeo P., Strausberg R.;
RT "Annotation of Pediculus humanus corporis strain USDA.";
RL Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:EEB13614.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=USDA {ECO:0000313|EMBL:EEB13614.1};
RG The Human Body Louse Genome Consortium;
RA Kirkness E., Walenz B., Hass B., Bruggner R., Strausberg R.;
RT "The genome of the human body louse.";
RL Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblMetazoa:PHUM249080-PA}
RP IDENTIFICATION.
RC STRAIN=USDA {ECO:0000313|EnsemblMetazoa:PHUM249080-PA};
RG EnsemblMetazoa;
RL Submitted (FEB-2021) to UniProtKB.
CC -!- SIMILARITY: Belongs to the archaeal Rpo3/eukaryotic RPB3 RNA polymerase
CC subunit family. {ECO:0000256|ARBA:ARBA00025804}.
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DR EMBL; AAZO01002888; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; DS235226; EEB13614.1; -; Genomic_DNA.
DR RefSeq; XP_002426352.1; XM_002426307.1.
DR AlphaFoldDB; E0VJQ8; -.
DR STRING; 121224.E0VJQ8; -.
DR EnsemblMetazoa; PHUM249080-RA; PHUM249080-PA; PHUM249080.
DR GeneID; 8235037; -.
DR KEGG; phu:Phum_PHUM249080; -.
DR CTD; 8235037; -.
DR VEuPathDB; VectorBase:PHUM249080; -.
DR eggNOG; KOG1522; Eukaryota.
DR HOGENOM; CLU_038421_1_0_1; -.
DR InParanoid; E0VJQ8; -.
DR OMA; PENIVMM; -.
DR OrthoDB; 5472982at2759; -.
DR Proteomes; UP000009046; Unassembled WGS sequence.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:InterPro.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR CDD; cd07031; RNAP_II_RPB3; 1.
DR Gene3D; 2.170.120.12; DNA-directed RNA polymerase, insert domain; 1.
DR Gene3D; 3.30.1360.10; RNA polymerase, RBP11-like subunit; 1.
DR HAMAP; MF_00320; RNApol_arch_Rpo3; 1.
DR InterPro; IPR011262; DNA-dir_RNA_pol_insert.
DR InterPro; IPR011263; DNA-dir_RNA_pol_RpoA/D/Rpb3.
DR InterPro; IPR036603; RBP11-like.
DR InterPro; IPR022842; RNAP_Rpo3/Rpb3/RPAC1.
DR InterPro; IPR036643; RNApol_insert_sf.
DR PANTHER; PTHR11800; DNA-DIRECTED RNA POLYMERASE; 1.
DR PANTHER; PTHR11800:SF2; DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB3; 1.
DR Pfam; PF01000; RNA_pol_A_bac; 1.
DR Pfam; PF01193; RNA_pol_L; 1.
DR SMART; SM00662; RPOLD; 1.
DR SUPFAM; SSF56553; Insert subdomain of RNA polymerase alpha subunit; 1.
DR SUPFAM; SSF55257; RBP11-like subunits of RNA polymerase; 1.
PE 3: Inferred from homology;
KW DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478,
KW ECO:0000313|EMBL:EEB13614.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000009046};
KW Transcription {ECO:0000256|ARBA:ARBA00023163}.
FT DOMAIN 18..262
FT /note="DNA-directed RNA polymerase RpoA/D/Rpb3-type"
FT /evidence="ECO:0000259|SMART:SM00662"
SQ SEQUENCE 275 AA; 31464 MW; F3EFA6F97CA4BDAE CRC64;
MPYANQPSVH ITDLTDENVK FQIEDTELSV ANSMRRVFIA ETPTMAIDWV QLEANSTVLA
DEFISHRVGL IPLTSDEVVD RIQYTRDCTC LDFCPECSVE FTLDVKCTDD HTRHVTTADL
KSSDPRVLPV TSRHREDDTS EYGEADEILI VKLRKGQELK LRAYAKKGFG KEHAKWNPTA
GVCFEYDPDN SMRHTLYPKP DEWPKSEYTE LDDTQCEAPY NWEARPNKFY FNVESVGALR
PENIVMMGVA VLKNKLSNLQ TQLSQELQHD ALTIQ
//
