ID E1VKN1_9GAMM Unreviewed; 569 AA.
AC E1VKN1;
DT 30-NOV-2010, integrated into UniProtKB/TrEMBL.
DT 30-NOV-2010, sequence version 1.
DT 27-MAR-2024, entry version 52.
DE SubName: Full=RNA-directed DNA polymerase (Reverse transcriptase) {ECO:0000313|EMBL:CBL45373.1};
GN ORFNames=HDN1F_17900 {ECO:0000313|EMBL:CBL45373.1}, HDN1F_35290
GN {ECO:0000313|EMBL:CBL47112.1};
OS gamma proteobacterium HdN1.
OC Bacteria; Pseudomonadota; Gammaproteobacteria.
OX NCBI_TaxID=83406 {ECO:0000313|EMBL:CBL45373.1, ECO:0000313|Proteomes:UP000002677};
RN [1] {ECO:0000313|EMBL:CBL45373.1, ECO:0000313|Proteomes:UP000002677}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=HdN1 {ECO:0000313|Proteomes:UP000002677};
RA Widdel F., Rabus R., Grundmann O., Werner I., Schreiber F., Ehrenreich P.,
RA Behrends A., Wilkes H., Kube M., Reinhardt R., Zedelius J.;
RT "Alkane degradation by a new type of denitrifying bacterium with possible
RT involvement of the electron acceptor in substrate activation.";
RL Environ. Microbiol. 0:0-0(2010).
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DR EMBL; FP929140; CBL45373.1; -; Genomic_DNA.
DR EMBL; FP929140; CBL47112.1; -; Genomic_DNA.
DR AlphaFoldDB; E1VKN1; -.
DR KEGG; gpb:HDN1F_17900; -.
DR KEGG; gpb:HDN1F_35290; -.
DR eggNOG; COG3344; Bacteria.
DR HOGENOM; CLU_013584_15_4_6; -.
DR OrthoDB; 9793236at2; -.
DR Proteomes; UP000002677; Chromosome.
DR GO; GO:0004519; F:endonuclease activity; IEA:InterPro.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd00085; HNHc; 1.
DR CDD; cd01651; RT_G2_intron; 1.
DR Gene3D; 1.10.30.50; -; 1.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR030931; Group_II_RT_mat.
DR InterPro; IPR002711; HNH.
DR InterPro; IPR003615; HNH_nuc.
DR InterPro; IPR013597; Mat_intron_G2.
DR InterPro; IPR000477; RT_dom.
DR InterPro; IPR025960; RVT_N.
DR NCBIfam; TIGR04416; group_II_RT_mat; 1.
DR PANTHER; PTHR34047:SF8; GROUP II INTRON-ASSOCIATED OPEN READING FRAME; 1.
DR PANTHER; PTHR34047; NUCLEAR INTRON MATURASE 1, MITOCHONDRIAL-RELATED; 1.
DR Pfam; PF08388; GIIM; 1.
DR Pfam; PF01844; HNH; 1.
DR Pfam; PF00078; RVT_1; 1.
DR Pfam; PF13655; RVT_N; 1.
DR SMART; SM00507; HNHc; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR PROSITE; PS50878; RT_POL; 1.
PE 4: Predicted;
KW Nucleotidyltransferase {ECO:0000313|EMBL:CBL45373.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000002677};
KW RNA-directed DNA polymerase {ECO:0000313|EMBL:CBL45373.1};
KW Transferase {ECO:0000313|EMBL:CBL45373.1}.
FT DOMAIN 95..331
FT /note="Reverse transcriptase"
FT /evidence="ECO:0000259|PROSITE:PS50878"
SQ SEQUENCE 569 AA; 64721 MW; C9E76D914AA6BD94 CRC64;
MTTQAVCAGA LSGDSGGWHS IDWAGCHREV RRLQARIVKA TQEGRWGKVK ALQWLLTHSF
SGKAMAVRRV TENQGKKTPG VDKVVWDTPE KKLCAMGDLK RRGYRPKPLK RVHIPKANGK
LRPLGIPTMK DRAMQALYLL GLLPVSETTA DGCSYGFRPE RSVADAIERC FNALGRRDAA
AWVLEADIKG CFDHISHDWL LGNVPMDKRV LATWLKCGFM EKAVWFATEA GTPQGGIISP
TLANFALDGL EQLLSKTFYR TMRHGKMVHP KVHLIRYADD FVITGSSEEL LVNEVKPLVE
RFLAERGLML SAEKTKVTHI DEGFDFLGQN VRKYDGKLLI KPSAANYSAC VDKIRTIIKS
HKTAKQATLI KKLNPVIHGW ANFHRHVVAK RQFQHLDRDI WRALWRWAKR RHPNKNHTWI
RERYFHVIGG RTWVFACERE ERTGNERRWV ELRSASDTKI KRHTVIRSDA NPFDPKWETY
FEGRIGAKMK ANLAGRKRLL HLWLEQDGKC PVCGEPLTKD SGWHVHHIVR RVDGGSNQRG
NLVMVHPNCH NQIHSLGLEV VKPAHANGL
//
