ID E2C3V8_HARSA Unreviewed; 231 AA.
AC E2C3V8;
DT 30-NOV-2010, integrated into UniProtKB/TrEMBL.
DT 30-NOV-2010, sequence version 1.
DT 24-JAN-2024, entry version 51.
DE SubName: Full=Zinc finger CCHC-type and RNA-binding motif-containing protein 1 {ECO:0000313|EMBL:EFN77344.1};
GN ORFNames=EAI_14474 {ECO:0000313|EMBL:EFN77344.1};
OS Harpegnathos saltator (Jerdon's jumping ant).
OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota;
OC Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea;
OC Formicidae; Ponerinae; Ponerini; Harpegnathos.
OX NCBI_TaxID=610380 {ECO:0000313|Proteomes:UP000008237};
RN [1] {ECO:0000313|EMBL:EFN77344.1, ECO:0000313|Proteomes:UP000008237}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=R22 G/1 {ECO:0000313|EMBL:EFN77344.1,
RC ECO:0000313|Proteomes:UP000008237};
RX PubMed=20798317; DOI=10.1126/science.1192428;
RA Bonasio R., Zhang G., Ye C., Mutti N.S., Fang X., Qin N., Donahue G.,
RA Yang P., Li Q., Li C., Zhang P., Huang Z., Berger S.L., Reinberg D.,
RA Wang J., Liebig J.;
RT "Genomic comparison of the ants Camponotus floridanus and Harpegnathos
RT saltator.";
RL Science 329:1068-1071(2010).
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DR EMBL; GL452364; EFN77344.1; -; Genomic_DNA.
DR RefSeq; XP_011150255.1; XM_011151953.2.
DR RefSeq; XP_019699983.1; XM_019844424.1.
DR AlphaFoldDB; E2C3V8; -.
DR STRING; 610380.E2C3V8; -.
DR EnsemblMetazoa; XM_011151953.3; XP_011150255.1; LOC105189682.
DR GeneID; 105189682; -.
DR KEGG; hst:105189682; -.
DR InParanoid; E2C3V8; -.
DR OMA; PTMIKIS; -.
DR OrthoDB; 2904750at2759; -.
DR PhylomeDB; E2C3V8; -.
DR Proteomes; UP000008237; Unassembled WGS sequence.
DR GO; GO:0005689; C:U12-type spliceosomal complex; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0000398; P:mRNA splicing, via spliceosome; IEA:InterPro.
DR Gene3D; 3.30.70.330; -; 1.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR InterPro; IPR044598; ZCRB1.
DR InterPro; IPR001878; Znf_CCHC.
DR PANTHER; PTHR46259; ZINC FINGER CCHC-TYPE AND RNA-BINDING MOTIF-CONTAINING PROTEIN 1; 1.
DR PANTHER; PTHR46259:SF1; ZINC FINGER CCHC-TYPE AND RNA-BINDING MOTIF-CONTAINING PROTEIN 1; 1.
DR Pfam; PF00076; RRM_1; 1.
DR SMART; SM00360; RRM; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR PROSITE; PS50102; RRM; 1.
DR PROSITE; PS50158; ZF_CCHC; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW mRNA processing {ECO:0000256|ARBA:ARBA00022664};
KW mRNA splicing {ECO:0000256|ARBA:ARBA00023187};
KW Reference proteome {ECO:0000313|Proteomes:UP000008237};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU00176}; Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00047}.
FT DOMAIN 9..87
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 106..121
FT /note="CCHC-type"
FT /evidence="ECO:0000259|PROSITE:PS50158"
FT REGION 137..180
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 194..231
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 140..178
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 194..212
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 231 AA; 26924 MW; 863D2DE69CF3AF9D CRC64;
MSDHIPSKST VYIANLPFCL TNNDVHQLLK DYGKIVKVTI LKDRITRLSR GVAFVLFFNR
EDAVRCASTL NNTELGGRIV KSSIAVDNGR SNEFTRRRYY PDKSQCYECG QEGHLSYCCS
NNMLGPRKLP PKRAKIRNKN MKQEKCDTNH YDSDSDEMPK KPKYDNDNIE DDFKEEPETL
SAVIALEQRR FEMENRHEEV IDGHDRKESS SLSKKRYKKN KYFSDEEDFS E
//
