ID E3MSV9_CAERE Unreviewed; 698 AA.
AC E3MSV9;
DT 11-JAN-2011, integrated into UniProtKB/TrEMBL.
DT 11-JAN-2011, sequence version 1.
DT 24-JAN-2024, entry version 47.
DE RecName: Full=Transcription elongation factor SPT5 {ECO:0008006|Google:ProtNLM};
GN ORFNames=CRE_15485 {ECO:0000313|EMBL:EFP08569.1};
OS Caenorhabditis remanei (Caenorhabditis vulgaris).
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=31234 {ECO:0000313|Proteomes:UP000008281};
RN [1] {ECO:0000313|Proteomes:UP000008281}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=PB4641 {ECO:0000313|Proteomes:UP000008281};
RG Caenorhabditis remanei Sequencing Consortium;
RA Wilson R.K.;
RT "PCAP assembly of the Caenorhabditis remanei genome.";
RL Submitted (JUL-2007) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; DS268474; EFP08569.1; -; Genomic_DNA.
DR RefSeq; XP_003100804.1; XM_003100756.1.
DR AlphaFoldDB; E3MSV9; -.
DR STRING; 31234.E3MSV9; -.
DR EnsemblMetazoa; CRE15485.1; CRE15485.1; WBGene00066314.
DR GeneID; 9815591; -.
DR KEGG; crq:GCK72_014230; -.
DR CTD; 9815591; -.
DR eggNOG; KOG1999; Eukaryota.
DR HOGENOM; CLU_394963_0_0_1; -.
DR InParanoid; E3MSV9; -.
DR OrthoDB; 24955at2759; -.
DR Proteomes; UP000008281; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR GO; GO:0032784; P:regulation of DNA-templated transcription elongation; IEA:InterPro.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IEA:InterPro.
DR CDD; cd06084; KOW_Spt5_4; 1.
DR CDD; cd06085; KOW_Spt5_5; 1.
DR Gene3D; 2.30.30.30; -; 1.
DR InterPro; IPR005824; KOW.
DR InterPro; IPR041977; KOW_Spt5_4.
DR InterPro; IPR041978; KOW_Spt5_5.
DR InterPro; IPR014722; Rib_uL2_dom2.
DR InterPro; IPR039659; SPT5.
DR InterPro; IPR024945; Spt5_C_dom.
DR PANTHER; PTHR11125; SUPPRESSOR OF TY 5; 1.
DR PANTHER; PTHR11125:SF7; TRANSCRIPTION ELONGATION FACTOR SPT5; 1.
DR Pfam; PF12815; CTD; 1.
DR SMART; SM01104; CTD; 2.
DR SMART; SM00739; KOW; 3.
PE 4: Predicted;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000008281}.
FT DOMAIN 87..121
FT /note="KOW"
FT /evidence="ECO:0000259|SMART:SM00739"
FT DOMAIN 216..243
FT /note="KOW"
FT /evidence="ECO:0000259|SMART:SM00739"
FT DOMAIN 298..420
FT /note="Spt5 C-terminal"
FT /evidence="ECO:0000259|SMART:SM01104"
FT DOMAIN 426..559
FT /note="Spt5 C-terminal"
FT /evidence="ECO:0000259|SMART:SM01104"
FT DOMAIN 643..670
FT /note="KOW"
FT /evidence="ECO:0000259|SMART:SM00739"
FT REGION 158..210
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 336..513
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 166..210
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 387..404
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 422..451
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 497..513
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 698 AA; 75276 MW; 7037C53E50D39513 CRC64;
MEELQVRVRD LQLCADVTTG VDSLGQFQFH DLVQLDHTGN VGVIIRLEKE NLEVLNMHGV
VSRIKPQAII AKKDVRFAKV LDSQNNSIEA KDLVKVISGL NIKERESDED PVGEVLYAFR
GTVFIYARKI AKNGGVMVCR PKQLLLQGAK KANNAPMISR MASPNPMASP RHSSSGMTSS
SHDGMSSRGS TGGQTPRQNQ PRHFGTANQQ KVRRDLTIIG KNVRITKGPM KGHFGIVRDA
TEDTVRVELH AQCRTVSVDR ARMMVVGDTG ITSSGSGTSF YNTAKTPMRD SSKTPMYGSK
TPMYGAQTPM YGAMTPHAGD RTPHYGAMTP AYGGRTPAYG DGSRTPAYGS KTPAYGDLDE
HSSARTPAYG NDNGRTPAYG HGSGRTPAYG NSENGRTPAY GGSTDSGRTP AYDHDSGRTP
GYESLPSRTP NYDSSKTPSY TNDFDTPTSP TYDPEPNEPY NNAPARTPAF DSGRTPGYET
YDSGSPTYDP EPTGETEDIG DTSSPTYDSP PHSYSVPTPG AMINPATPGA YHVDTPGPFV
APMTPGSGGA YDQYVAPSPY MGGGFEANNF NNAGGAIESI PEHFLVQGHW IMSNLYVVIK
EHDPRYNDRE AIVQNVNDGK VDIYIPDLKC NLEVDFDQLS PTRPQPGDFA RVIFGHDGGH
SGQVVSMDGV DALIRSQSDI SDMRSCNIGL CCKMHGGV
//
