ID E3SDK3_CHLSU Unreviewed; 604 AA.
AC E3SDK3;
DT 11-JAN-2011, integrated into UniProtKB/TrEMBL.
DT 11-JAN-2011, sequence version 1.
DT 13-SEP-2023, entry version 24.
DE SubName: Full=Reverse transcriptase-maturase-endonuclease {ECO:0000313|EMBL:ADH52724.1};
DE Flags: Fragment;
OS Chlamydomonas subcaudata.
OG Plastid; Chloroplast {ECO:0000313|EMBL:ADH52724.1}.
OC Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Chlorophyceae;
OC CS clade; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas.
OX NCBI_TaxID=163303 {ECO:0000313|EMBL:ADH52724.1};
RN [1] {ECO:0000313|EMBL:ADH52724.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=SAG 12.87 {ECO:0000313|EMBL:ADH52724.1};
RA Odom O.W., Herrin D.L.;
RT "AN UNPRECEDENTED GROUP-II INTRON FROM CHLAMYDOMONAS SUBCAUDATA
RT (CHLOROPHYCEAE) THAT HAS TWO LARGE OPEN READING FRAMES-POTENTIALLY ENCODING
RT A REVERSE TRANSCRIPTASE-MATURASE-ENDONUCLEASE AND A NOVEL PROTEIN.";
RL J. Phycol. 46:969-973(2010).
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DR EMBL; GQ868651; ADH52724.1; -; Genomic_DNA.
DR GO; GO:0009507; C:chloroplast; IEA:UniProtKB-KW.
DR GO; GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd00085; HNHc; 1.
DR CDD; cd01651; RT_G2_intron; 1.
DR Gene3D; 1.10.30.50; -; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR030931; Group_II_RT_mat.
DR InterPro; IPR002711; HNH.
DR InterPro; IPR003615; HNH_nuc.
DR InterPro; IPR013597; Mat_intron_G2.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR000477; RT_dom.
DR InterPro; IPR025960; RVT_N.
DR NCBIfam; TIGR04416; group_II_RT_mat; 1.
DR PANTHER; PTHR34047:SF8; GROUP II INTRON-ASSOCIATED OPEN READING FRAME; 1.
DR PANTHER; PTHR34047; NUCLEAR INTRON MATURASE 1, MITOCHONDRIAL-RELATED; 1.
DR Pfam; PF08388; GIIM; 1.
DR Pfam; PF01844; HNH; 1.
DR Pfam; PF00078; RVT_1; 1.
DR Pfam; PF13655; RVT_N; 1.
DR SMART; SM00507; HNHc; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR PROSITE; PS50878; RT_POL; 1.
PE 4: Predicted;
KW Chloroplast {ECO:0000313|EMBL:ADH52724.1};
KW Endonuclease {ECO:0000313|EMBL:ADH52724.1};
KW Hydrolase {ECO:0000313|EMBL:ADH52724.1};
KW Nuclease {ECO:0000313|EMBL:ADH52724.1};
KW Nucleotidyltransferase {ECO:0000313|EMBL:ADH52724.1};
KW Plastid {ECO:0000313|EMBL:ADH52724.1};
KW RNA-directed DNA polymerase {ECO:0000313|EMBL:ADH52724.1};
KW Transferase {ECO:0000313|EMBL:ADH52724.1}.
FT DOMAIN 99..334
FT /note="Reverse transcriptase"
FT /evidence="ECO:0000259|PROSITE:PS50878"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:ADH52724.1"
SQ SEQUENCE 604 AA; 70071 MW; D4A9DCEB452FF9BE CRC64;
TNLFDVTLEP QTLNILSDWY DVSWVGVNQE VNRLRKRIFR AARNRNFKNL RNLQRLMICS
ESNLLFSIRK VTYSSGGKTP GMDGITYTTP AERFSLFQKL LTYNLDGHLA VPVKRIHIPK
PDGRVRPLGI PTVFDRVLQM VIKNALEPEW ESQFESGSYG FRPRRSVNDA INRIYLALNK
PGSRTWVLDA DVSVCFDTIS HEYLLQELKH FPYLDIINKW LKSGITFSNV WFESDXGTPQ
GGVLSPLLCN IALHGMEKEL GVRTYNAKGH VDSNGPLMIR YADDFVVFYR SKQEAENGLD
VVKDSLKKRG LTISEAKTRI VHAAQGFNFL GFNICYRPKD GKYLGTCIIP IGNGDFFVKY
EDVGTYIQPG EKSITNFKNK MREIFKSHHG KNCKALCLKA NAVIRGWANS KRAWHSNRTF
RNLDHFLFDL QWAWACRQHP NKNKTWVREN YFTHLIAGPI NNKWVFHAKG KSKIYMYQLK
WFPIQRHILV QSAACADDPN FTDYWVKLDN IRMNKKLFNY WNHSDDDLSK SQFEICPICL
ESLFNGEEIH RHHIIEQRKG GPSNFSNLLF LHLPCHYQVH HSRGEKQEEL QNILVAFKKS
HPNR
//
