ID E4NWP8_HALBP Unreviewed; 244 AA.
AC E4NWP8;
DT 08-FEB-2011, integrated into UniProtKB/TrEMBL.
DT 08-FEB-2011, sequence version 1.
DT 27-MAR-2024, entry version 63.
DE SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:ADQ69468.1};
GN OrderedLocusNames=Hbor_37620 {ECO:0000313|EMBL:ADQ69468.1};
GN ORFNames=C499_12875 {ECO:0000313|EMBL:ELY25776.1};
OS Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 /
OS KCTC 4070 / PR3).
OG Plasmid pHBOR04 {ECO:0000313|EMBL:ADQ69468.1,
OG ECO:0000313|Proteomes:UP000006663}.
OC Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Haloferacales;
OC Haloferacaceae; Halogeometricum.
OX NCBI_TaxID=469382 {ECO:0000313|EMBL:ADQ69468.1, ECO:0000313|Proteomes:UP000006663};
RN [1] {ECO:0000313|Proteomes:UP000006663}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 700274 / DSM 11551 / JCM 10706 / KCTC 4070 / PR3
RC {ECO:0000313|Proteomes:UP000006663};
RC PLASMID=pHBOR04 {ECO:0000313|Proteomes:UP000006663};
RX PubMed=21304651; DOI=10.4056/sigs.23264;
RA Malfatti S., Tindall B.J., Schneider S., Fahnrich R., Lapidus A.,
RA Labuttii K., Copeland A., Glavina Del Rio T., Nolan M., Chen F., Lucas S.,
RA Tice H., Cheng J.F., Bruce D., Goodwin L., Pitluck S., Anderson I.,
RA Pati A., Ivanova N., Mavromatis K., Chen A., Palaniappan K.,
RA D'haeseleer P., Goker M., Bristow J., Eisen J.A., Markowitz V.,
RA Hugenholtz P., Kyrpides N.C., Klenk H.P., Chain P.;
RT "Complete genome sequence of Halogeometricum borinquense type strain
RT (PR3).";
RL Stand. Genomic Sci. 1:150-159(2009).
RN [2] {ECO:0000313|EMBL:ADQ69468.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=PR 3 {ECO:0000313|EMBL:ADQ69468.1};
RC PLASMID=pHBOR04 {ECO:0000313|EMBL:ADQ69468.1};
RG US DOE Joint Genome Institute (JGI-PGF);
RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K.,
RA Mikhailova N., Anderson I., Brettin T., Detter J.C., Han C., Larimer F.,
RA Land M., Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T.,
RA Wu D., Tindal B., Klenk H.-P., Eisen J.A.;
RT "The complete plasmid4 of Halogeometricum borinquense DSM 11551.";
RL Submitted (AUG-2009) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:ELY25776.1, ECO:0000313|Proteomes:UP000011585}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 11551 {ECO:0000313|EMBL:ELY25776.1,
RC ECO:0000313|Proteomes:UP000011585};
RX PubMed=25393412; DOI=10.1371/journal.pgen.1004784;
RA Becker E.A., Seitzer P.M., Tritt A., Larsen D., Krusor M., Yao A.I., Wu D.,
RA Madern D., Eisen J.A., Darling A.E., Facciotti M.T.;
RT "Phylogenetically driven sequencing of extremely halophilic archaea reveals
RT strategies for static and dynamic osmo-response.";
RL PLoS Genet. 10:E1004784-E1004784(2014).
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DR EMBL; CP001694; ADQ69468.1; -; Genomic_DNA.
DR EMBL; AOHT01000043; ELY25776.1; -; Genomic_DNA.
DR AlphaFoldDB; E4NWP8; -.
DR KEGG; hbo:Hbor_37620; -.
DR HOGENOM; CLU_062618_6_1_2; -.
DR OrthoDB; 14763at2157; -.
DR Proteomes; UP000006663; Plasmid pHBOR04.
DR Proteomes; UP000011585; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00090; HTH_ARSR; 1.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR011991; ArsR-like_HTH.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR014757; Tscrpt_reg_IclR_C.
DR InterPro; IPR005471; Tscrpt_reg_IclR_N.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR30136; HELIX-TURN-HELIX TRANSCRIPTIONAL REGULATOR, ICLR FAMILY; 1.
DR PANTHER; PTHR30136:SF35; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF09339; HTH_IclR; 1.
DR Pfam; PF01614; IclR; 1.
DR SMART; SM00346; HTH_ICLR; 1.
DR SUPFAM; SSF55781; GAF domain-like; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS51077; HTH_ICLR; 1.
DR PROSITE; PS51078; ICLR_ED; 1.
PE 4: Predicted;
KW Plasmid {ECO:0000313|EMBL:ADQ69468.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000006663};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 2..61
FT /note="HTH iclR-type"
FT /evidence="ECO:0000259|PROSITE:PS51077"
FT DOMAIN 62..242
FT /note="IclR-ED"
FT /evidence="ECO:0000259|PROSITE:PS51078"
SQ SEQUENCE 244 AA; 26434 MW; 2E432AA4E80F6E01 CRC64;
MVGATETSFD ILQALRELGG AGVTETAEHL DIPKSTAHKH LHTLAQLGYV TNEDGTYDLG
LLFVGLGQYV QANSALVQAT GPVVERLAET TEAVAGFFVE RGGRGFEVNQ VTAGTSRDLD
GGLSKYLHST APGKAILAKL PDERVDEIVD QHGLPALTPH TITTRSALED ELARIRDRGI
AFDREENRTG MRGVAIPVVH DGIRGAMYVV GPQRRLTGKW FNENIPGIII SSVKTVEQRL
REQD
//
