ID E4RN39_HALHG Unreviewed; 417 AA.
AC E4RN39;
DT 08-FEB-2011, integrated into UniProtKB/TrEMBL.
DT 08-FEB-2011, sequence version 1.
DT 27-MAR-2024, entry version 51.
DE SubName: Full=Transposase, IS605 OrfB family {ECO:0000313|EMBL:ADQ14256.1};
GN OrderedLocusNames=Halsa_0809 {ECO:0000313|EMBL:ADQ14256.1};
OS Halanaerobium hydrogeniformans (Halanaerobium sp. (strain sapolanicus)).
OC Bacteria; Bacillota; Clostridia; Halanaerobiales; Halanaerobiaceae;
OC Halanaerobium.
OX NCBI_TaxID=656519 {ECO:0000313|EMBL:ADQ14256.1, ECO:0000313|Proteomes:UP000007434};
RN [1] {ECO:0000313|EMBL:ADQ14256.1, ECO:0000313|Proteomes:UP000007434}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=sapolanicus {ECO:0000313|Proteomes:UP000007434};
RG US DOE Joint Genome Institute;
RA Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L.,
RA Pitluck S., Davenport K., Detter J.C., Han C., Tapia R., Land M.,
RA Hauser L., Jeffries C., Kyrpides N., Ivanova N., Mikhailova N.,
RA Begemann M.B., Mormile M.R., Wall J.D., Elias D.A., Woyke T.;
RT "Complete sequence of Halanaerobium sp. sapolanicus.";
RL Submitted (NOV-2010) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ADQ14256.1, ECO:0000313|Proteomes:UP000007434}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=sapolanicus {ECO:0000313|Proteomes:UP000007434};
RX PubMed=21602336; DOI=10.1128/JB.05209-11;
RA Brown S.D., Begemann M.B., Mormile M.R., Wall J.D., Han C.S., Goodwin L.A.,
RA Pitluck S., Land M.L., Hauser L.J., Elias D.A.;
RT "Complete Genome Sequence of the Haloalkaliphilic, Hydrogen Producing
RT Halanaerobium hydrogenoformans.";
RL J. Bacteriol. 193:3682-3683(2011).
CC -!- SIMILARITY: In the C-terminal section; belongs to the transposase 35
CC family. {ECO:0000256|ARBA:ARBA00008761}.
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DR EMBL; CP002304; ADQ14256.1; -; Genomic_DNA.
DR RefSeq; WP_013405347.1; NC_014654.1.
DR AlphaFoldDB; E4RN39; -.
DR STRING; 656519.Halsa_0809; -.
DR KEGG; has:Halsa_0809; -.
DR eggNOG; COG0675; Bacteria.
DR HOGENOM; CLU_032903_16_0_9; -.
DR OrthoDB; 442799at2; -.
DR Proteomes; UP000007434; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR GO; GO:0032196; P:transposition; IEA:UniProtKB-KW.
DR InterPro; IPR010095; Cas12f1-like_TNB.
DR InterPro; IPR001959; Transposase.
DR NCBIfam; NF040570; guided_TnpB; 1.
DR NCBIfam; TIGR01766; IS200/IS605 family accessory protein TnpB-like domain; 1.
DR Pfam; PF01385; OrfB_IS605; 1.
DR Pfam; PF07282; OrfB_Zn_ribbon; 1.
PE 3: Inferred from homology;
KW DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000007434};
KW Transposition {ECO:0000256|ARBA:ARBA00022578}.
FT DOMAIN 182..300
FT /note="Probable transposase IS891/IS1136/IS1341"
FT /evidence="ECO:0000259|Pfam:PF01385"
FT DOMAIN 316..388
FT /note="Cas12f1-like TNB"
FT /evidence="ECO:0000259|Pfam:PF07282"
SQ SEQUENCE 417 AA; 48923 MW; 6A87D3143CA73A9D CRC64;
MRLSFKFKPK LSHKQLVIIN ELAWHISKLY NTVNYEVKNN KDIKAVYTEL ETRYKNNWHN
DYLHSHNRQQ ALKQLAQDWK SFFNSLKDYK KNPQKYKGQP GSPNFKHMNS NPCEIIFTNL
AVRIKDNKLL LSLSKKIQSK YNVKALNFEL PEAVQSIIDL DAGQQIKIKQ DRISKRWYLL
IIYKVEEIKE NNNPNIMAID LGLDNLATLT FKNNSECYII NGKTIKSKNS YFNKEIARLQ
SIRMRQLATS KIRDTKRIKY LRLKRRNYIR DYLHKASCKI VDLAIENQVE TIVIGDIKNI
KKCSKLKSFV QIPIQRLKKL IEYKAKLKGI KVVEIDESYT SGCSSVDLEK INKSNYDKSR
RITRGLFKTN EGLLINADQN GSFNILRKYH NDKCILRPIK EARDNGFVDN PSRLRVS
//
