ID E4THH5_CALNY Unreviewed; 710 AA.
AC E4THH5;
DT 08-FEB-2011, integrated into UniProtKB/TrEMBL.
DT 08-FEB-2011, sequence version 1.
DT 27-MAR-2024, entry version 59.
DE SubName: Full=Tex-like protein {ECO:0000313|EMBL:ADR19910.1};
GN OrderedLocusNames=Calni_2016 {ECO:0000313|EMBL:ADR19910.1};
OS Calditerrivibrio nitroreducens (strain DSM 19672 / NBRC 101217 / Yu37-1).
OC Bacteria; Deferribacterota; Deferribacteres; Deferribacterales;
OC Calditerrivibrionaceae.
OX NCBI_TaxID=768670 {ECO:0000313|EMBL:ADR19910.1, ECO:0000313|Proteomes:UP000007039};
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 19672;
RG US DOE Joint Genome Institute (JGI-PGF);
RA Lucas S., Copeland A., Lapidus A., Bruce D., Goodwin L., Pitluck S.,
RA Kyrpides N., Mavromatis K., Ivanova N., Mikhailova N., Zeytun A.,
RA Brettin T., Detter J.C., Tapia R., Han C., Land M., Hauser L.,
RA Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Spring S.,
RA Schroeder M., Brambilla E., Klenk H.-P., Eisen J.A.;
RT "The complete genome of chromosome of Calditerrivibrio nitroreducens DSM
RT 19672.";
RL Submitted (NOV-2010) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ADR19910.1, ECO:0000313|Proteomes:UP000007039}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 19672 / NBRC 101217 / Yu37-1
RC {ECO:0000313|Proteomes:UP000007039};
RX PubMed=21475587; DOI=10.4056/sigs.1523807;
RA Pitluck S., Sikorski J., Zeytun A., Lapidus A., Nolan M., Lucas S.,
RA Hammon N., Deshpande S., Cheng J.F., Tapia R., Han C., Goodwin L.,
RA Liolios K., Pagani I., Ivanova N., Mavromatis K., Pati A., Chen A.,
RA Palaniappan K., Hauser L., Chang Y.J., Jeffries C.D., Detter J.C.,
RA Brambilla E., Djao O.D., Rohde M., Spring S., Goker M., Woyke T.,
RA Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Kyrpides N.C.,
RA Klenk H.P., Land M.;
RT "Complete genome sequence of Calditerrivibrio nitroreducens type strain
RT (Yu37-1).";
RL Stand. Genomic Sci. 4:54-62(2011).
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DR EMBL; CP002347; ADR19910.1; -; Genomic_DNA.
DR AlphaFoldDB; E4THH5; -.
DR STRING; 768670.Calni_2016; -.
DR KEGG; cni:Calni_2016; -.
DR eggNOG; COG2183; Bacteria.
DR HOGENOM; CLU_009833_0_2_0; -.
DR OrthoDB; 9804714at2; -.
DR Proteomes; UP000007039; Chromosome.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
DR CDD; cd05685; S1_Tex; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR Gene3D; 1.10.10.650; RuvA domain 2-like; 1.
DR Gene3D; 1.10.3500.10; Tex N-terminal region-like; 1.
DR Gene3D; 1.10.150.310; Tex RuvX-like domain-like; 1.
DR Gene3D; 3.30.420.140; YqgF/RNase H-like domain; 1.
DR InterPro; IPR041692; HHH_9.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR010994; RuvA_2-like.
DR InterPro; IPR003029; S1_domain.
DR InterPro; IPR044146; S1_Tex.
DR InterPro; IPR023323; Tex-like_dom_sf.
DR InterPro; IPR023319; Tex-like_HTH_dom_sf.
DR InterPro; IPR018974; Tex-like_N.
DR InterPro; IPR032639; Tex_YqgF.
DR InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR PANTHER; PTHR10724:SF10; S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1; 1.
DR Pfam; PF12836; HHH_3; 1.
DR Pfam; PF17674; HHH_9; 1.
DR Pfam; PF00575; S1; 1.
DR Pfam; PF09371; Tex_N; 1.
DR Pfam; PF16921; Tex_YqgF; 1.
DR SMART; SM00316; S1; 1.
DR SMART; SM00732; YqgFc; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR SUPFAM; SSF47781; RuvA domain 2-like; 2.
DR SUPFAM; SSF158832; Tex N-terminal region-like; 1.
DR PROSITE; PS50126; S1; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000007039}.
FT DOMAIN 636..705
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
SQ SEQUENCE 710 AA; 80491 MW; C97330D2A5C02F3E CRC64;
MYHQIADEFQ IKPDYIKSLI ELNESGATVP FIARYRKEQT GGMTETTIRQ VLDRWNYLQS
LNKRKIEVIE AIKEKGKLTD EIEKLIATAT TLKEVEDIYA PYKSKKKTKA DIAIEKGLLP
LAEFIQSTED EGKILDFSEK FLNEESTSKD QVISEALEIL INKIGHDLDV KKMVRELVWQ
HSFIVVEKRK DVEGRTNYED YYNFKQEVSK LPPHRTLAIF RGEKEKILKV KYDHDDDILL
SAITSIAKNK GYSENSYCHK LIRDAYKRMI IPAIELEIRD ELWENAENKA IEIFAKNLKS
LLMTPPVKNI SILGIDPAFR TGCKFAAVDP TGKVLEYGVI YPTEPQNDYE NSKKRILDLI
KKHNINAIAI GNGTASRETE EFISKVIEEE NLTLSYTIVS EAGASVYSAS EIGVKEFPEL
DVTIRGAISI ARRVIDPLAE LIKIDPKSIG VGMYQHDVNQ KKLQERLNDV VVDVVNSVGV
DLNTASASLL KYVSGLNSSL AEGIVAYREK NGTFKSREEL KNVSGIGEMI YNQAAGFLKI
YSGTEPLDRM FIHPEQYENV YKLLNHLGLQ IENARMIRLT LKSKNITDIS KQFGIGELTL
NDIITNLEKP DLDIRDSVDP VIFKKGLLKI EDLKEGMIID GKVTNIVDFG VFVDIGLKES
GFIHISELSD RYIKHPSHIL EVGNKIKAKI KSIDMERKRI SLSKKGINEN
//
