ID E5FDG6_9BACT Unreviewed; 412 AA.
AC E5FDG6;
DT 08-FEB-2011, integrated into UniProtKB/TrEMBL.
DT 08-FEB-2011, sequence version 1.
DT 27-MAR-2024, entry version 30.
DE RecName: Full=DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00012418};
DE EC=2.7.7.6 {ECO:0000256|ARBA:ARBA00012418};
DE Flags: Fragment;
OS uncultured bacterium.
OC Bacteria; environmental samples.
OX NCBI_TaxID=77133 {ECO:0000313|EMBL:ADQ73698.1};
RN [1] {ECO:0000313|EMBL:ADQ73698.1}
RP NUCLEOTIDE SEQUENCE.
RA Shu Q., Jiao N.;
RT "A novel culture-independent rpoB gene approach to decipher unique
RT microbial diversity characteristics in environmental samples.";
RL Submitted (JUN-2010) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; HM445757; ADQ73698.1; -; Genomic_DNA.
DR AlphaFoldDB; E5FDG6; -.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-EC.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR Gene3D; 1.10.132.30; -; 1.
DR Gene3D; 1.10.40.90; -; 1.
DR Gene3D; 2.40.40.20; -; 1.
DR Gene3D; 1.10.274.100; RNA polymerase Rpb1, domain 3; 1.
DR InterPro; IPR045867; DNA-dir_RpoC_beta_prime.
DR InterPro; IPR000722; RNA_pol_asu.
DR InterPro; IPR006592; RNA_pol_N.
DR InterPro; IPR007066; RNA_pol_Rpb1_3.
DR InterPro; IPR042102; RNA_pol_Rpb1_3_sf.
DR InterPro; IPR007083; RNA_pol_Rpb1_4.
DR InterPro; IPR038120; Rpb1_funnel_sf.
DR PANTHER; PTHR19376; DNA-DIRECTED RNA POLYMERASE; 1.
DR PANTHER; PTHR19376:SF54; DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA; 1.
DR Pfam; PF00623; RNA_pol_Rpb1_2; 2.
DR Pfam; PF04983; RNA_pol_Rpb1_3; 1.
DR Pfam; PF05000; RNA_pol_Rpb1_4; 1.
DR SMART; SM00663; RPOLA_N; 1.
DR SUPFAM; SSF64484; beta and beta-prime subunits of DNA dependent RNA-polymerase; 1.
PE 4: Predicted;
KW DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478};
KW Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT DOMAIN 1..187
FT /note="RNA polymerase N-terminal"
FT /evidence="ECO:0000259|SMART:SM00663"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:ADQ73698.1"
FT NON_TER 412
FT /evidence="ECO:0000313|EMBL:ADQ73698.1"
SQ SEQUENCE 412 AA; 46619 MW; C03C67104DAB5557 CRC64;
TDMIKGKQGR FRENLLGKRV DYSARSVIVV GPRLRLHQCG LPKKIALELY QPFIIRKLKD
LGHADTIKSA KKMLERKDEE VWDILEQVIR NHPVLLNRAP TLHRMGIQAF GPNLVEGNAI
HLHPLVCKGF NADFDGDQMA VHLPLSLEAQ VEAHTLMMST HNIFAPSNGR PIMSPSQDTV
MGCYFITIEK PAMKGEGMVF SSMAEADLAF NQGVIHLHAR IKVRLPKHRR LKTEEGTAKF
GDLIETTYGR VMFNMMLPDG LDYYNFALRG SDLASVISDC YQRLGRRATI NLLDDMNQLG
FRESTRSGLS FGTDDLVTPD SKFTFISATE KEVMKLKKSH DRGLMTAQER YRSVLDLWTH
ARENISRDMM QAMEHDEHLG AWYVNPVFLM AHSGARGGIE QIRQLAGMRG LM
//
