ID E5FDR7_9BACT Unreviewed; 413 AA.
AC E5FDR7;
DT 08-FEB-2011, integrated into UniProtKB/TrEMBL.
DT 08-FEB-2011, sequence version 1.
DT 27-MAR-2024, entry version 29.
DE RecName: Full=DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00012418};
DE EC=2.7.7.6 {ECO:0000256|ARBA:ARBA00012418};
DE Flags: Fragment;
OS uncultured bacterium.
OC Bacteria; environmental samples.
OX NCBI_TaxID=77133 {ECO:0000313|EMBL:ADQ73799.1};
RN [1] {ECO:0000313|EMBL:ADQ73799.1}
RP NUCLEOTIDE SEQUENCE.
RA Shu Q., Jiao N.;
RT "A novel culture-independent rpoB gene approach to decipher unique
RT microbial diversity characteristics in environmental samples.";
RL Submitted (JUN-2010) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; HM445858; ADQ73799.1; -; Genomic_DNA.
DR AlphaFoldDB; E5FDR7; -.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-EC.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR Gene3D; 1.10.132.30; -; 1.
DR Gene3D; 1.10.40.90; -; 1.
DR Gene3D; 2.40.40.20; -; 1.
DR Gene3D; 1.10.274.100; RNA polymerase Rpb1, domain 3; 1.
DR InterPro; IPR045867; DNA-dir_RpoC_beta_prime.
DR InterPro; IPR000722; RNA_pol_asu.
DR InterPro; IPR006592; RNA_pol_N.
DR InterPro; IPR007066; RNA_pol_Rpb1_3.
DR InterPro; IPR042102; RNA_pol_Rpb1_3_sf.
DR InterPro; IPR007083; RNA_pol_Rpb1_4.
DR InterPro; IPR038120; Rpb1_funnel_sf.
DR PANTHER; PTHR19376; DNA-DIRECTED RNA POLYMERASE; 1.
DR PANTHER; PTHR19376:SF54; DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA; 1.
DR Pfam; PF00623; RNA_pol_Rpb1_2; 2.
DR Pfam; PF04983; RNA_pol_Rpb1_3; 1.
DR Pfam; PF05000; RNA_pol_Rpb1_4; 1.
DR SMART; SM00663; RPOLA_N; 1.
DR SUPFAM; SSF64484; beta and beta-prime subunits of DNA dependent RNA-polymerase; 1.
PE 4: Predicted;
KW DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478};
KW Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT DOMAIN 1..187
FT /note="RNA polymerase N-terminal"
FT /evidence="ECO:0000259|SMART:SM00663"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:ADQ73799.1"
FT NON_TER 413
FT /evidence="ECO:0000313|EMBL:ADQ73799.1"
SQ SEQUENCE 413 AA; 46623 MW; 2BC2C5DAE880D96D CRC64;
TDMIKGKQGR FRENLLGKRV DSSARSVIVV GPRLRLHQCG LPKKIALELY QPFIIRRLKE
LKHADTIKSA KKMLERKDEE VWDILEQVIK NHPVLLNRAP TLHRMGIQAF EPILVEGNAI
HLHPLVCRGF NADFDGDQMA VHLPLSIEAQ VEAHTLMMST HNIFAPSNGK PIMSPSQDTV
MGCNYITLEK PDRKGQGMVF SSTDEADFAF AQKVIDLHAR IKVRLPANRK LRTDDGKALP
GAIVETTYGR ILFNSILPQG MDFYNLSLKG SDLARVISDC YQKLGRRATI KLLDDMNQLG
FRESTRSGLS FGTDDLVTPD SKHKILADAE KKVMNFQKNY NKGLITPEER YNQVLDTWTH
ARELITKDML QAMEHDEHRG TWYVNPVFLM ASSGARGGIE QIRQLAGMRG LMA
//
