ID E5RKC9_9EUKA Unreviewed; 931 AA.
AC E5RKC9;
DT 08-MAR-2011, integrated into UniProtKB/TrEMBL.
DT 08-MAR-2011, sequence version 1.
DT 27-MAR-2024, entry version 39.
DE RecName: Full=DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00012418};
DE EC=2.7.7.6 {ECO:0000256|ARBA:ARBA00012418};
DE Flags: Fragment;
OS Monosiga ovata.
OC Eukaryota; Choanoflagellata; Craspedida; Salpingoecidae; Monosiga.
OX NCBI_TaxID=81526 {ECO:0000313|EMBL:BAJ52638.1};
RN [1] {ECO:0000313|EMBL:BAJ52638.1}
RP NUCLEOTIDE SEQUENCE.
RA Suga H., Miyata T.;
RT "Divergence pattern of animal gene families and relationship with evolution
RT of multicellular systems.";
RL Submitted (DEC-2002) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; AB098204; BAJ52638.1; -; mRNA.
DR AlphaFoldDB; E5RKC9; -.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0043229; C:intracellular organelle; IEA:UniProt.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-EC.
DR GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR CDD; cd02736; RNAP_III_Rpc1_C; 1.
DR Gene3D; 1.10.132.30; -; 1.
DR Gene3D; 1.10.150.390; -; 1.
DR Gene3D; 2.40.40.20; -; 1.
DR Gene3D; 6.10.250.2940; -; 1.
DR Gene3D; 6.20.50.80; -; 1.
DR Gene3D; 1.10.274.100; RNA polymerase Rpb1, domain 3; 1.
DR InterPro; IPR045867; DNA-dir_RpoC_beta_prime.
DR InterPro; IPR007066; RNA_pol_Rpb1_3.
DR InterPro; IPR042102; RNA_pol_Rpb1_3_sf.
DR InterPro; IPR007083; RNA_pol_Rpb1_4.
DR InterPro; IPR007081; RNA_pol_Rpb1_5.
DR InterPro; IPR035698; RNAP_III_Rpc1_C.
DR InterPro; IPR038120; Rpb1_funnel_sf.
DR PANTHER; PTHR19376; DNA-DIRECTED RNA POLYMERASE; 1.
DR PANTHER; PTHR19376:SF32; DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC1; 1.
DR Pfam; PF04983; RNA_pol_Rpb1_3; 1.
DR Pfam; PF05000; RNA_pol_Rpb1_4; 1.
DR Pfam; PF04998; RNA_pol_Rpb1_5; 1.
DR SUPFAM; SSF64484; beta and beta-prime subunits of DNA dependent RNA-polymerase; 1.
PE 2: Evidence at transcript level;
KW DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478};
KW Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT DOMAIN 23..219
FT /note="RNA polymerase Rpb1"
FT /evidence="ECO:0000259|Pfam:PF04983"
FT DOMAIN 246..350
FT /note="RNA polymerase Rpb1"
FT /evidence="ECO:0000259|Pfam:PF05000"
FT DOMAIN 357..854
FT /note="RNA polymerase Rpb1"
FT /evidence="ECO:0000259|Pfam:PF04998"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:BAJ52638.1"
SQ SEQUENCE 931 AA; 102101 MW; 00A55699B1783DF1 CRC64;
NIHVPQTETA RAEALVLMGT KSNICTPRNG DPLIAATQDF LTGAFLLSLR DTLFTRQRFC
QLATYLTEGR TFVKLPPPCI VKPVQMWSGK QLLSLLLRPV VAPGQPLPRN NCINLETQTK
SYSDSKISLS PDAPDAVAQY SKPVLSMCPE DGYLVIRNSE LLCGVLDKSV LGSGSKTTIF
YVLLRDCGEQ AAADAMSRLA KVASFFLMNR GFSIGITDVR PSATLLETKE GLVRAGYQKC
EDFVQQYKAG QLQTQPGCNA EQTLENVMTK ELNSIRESSG KACNSDLPRS NAPLIMAKCG
SKGSLLNLSQ MIACVGQQTV GGSRIPDGFE ERTLPHFGRL DRHPAAKGFV RNSFYTGLTP
TEFFFHTMGG REGLVDTAVK TAETGYMQRR LMKALEDLST HYDLSVRTSV GAVIQFRYGD
DGLDPVEMEG DSAPIKWDHT FAHVINSTPS NGEQGLLPYQ IEEAYADIIR TPMFAFFHRQ
RPAEAAEHIF ITQLRDFLHK KAAFLAGLRA RMGVPGFRTA DDSIGTLPAG EQPAIAEAVE
QIFRLTEAQL QLFCQACCDK YQRACIEAGT AVGAVCGQSL GEPTTQMTLK TFHFSGIASM
NITLGVPRIK EIINAVKNTS TPIITAVLEP GSTAMSAQIV KSRIEKTLLG EIMDYIEEVL
TPSGCYVLVK LDMARVHKLQ LEVDVHTVET AILERCGKLK LKRQNVWVMR GNKIAVSPPS
QSKSNAYFVL QQLKAELPHV VIRGVDRISR AVVQKVDEKG RAVFKVLAEG DNLLHVMGTR
GVLGTRVTSN HILDVERTLG IEAARATIIS EVGQTVAPYG VSIDWRHLSI LADLMTSRGE
VLGITRFGIA KMNERVLMLA SFEKTNDILF DAAVHGLKDD IDGVSECIIL GVPISLGTGL
FSLMRRADNI QPPTRRSVLF DRPEVLPKHV K
//
